Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 MIR3180-4-201ENST00000582223 153 ntBASIC13.61□□□□□ -0.23
CCL20P78556 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL20P78556 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL20P78556 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL20P78556 AL031985.4-201ENST00000642138 673 ntBASIC13.61□□□□□ -0.23
CCL20P78556 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL20P78556 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL20P78556 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL20P78556 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
CCL20P78556 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL20P78556 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL20P78556 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL20P78556 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL20P78556 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL20P78556 MTHFR-217ENST00000641820 1569 ntBASIC13.61□□□□□ -0.23
CCL20P78556 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CCL20P78556 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL20P78556 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL20P78556 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL20P78556 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL20P78556 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL20P78556 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL20P78556 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CCL20P78556 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL20P78556 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL20P78556 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL20P78556 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CCL20P78556 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL20P78556 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CCL20P78556 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC13.6□□□□□ -0.23
CCL20P78556 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.6□□□□□ -0.23
CCL20P78556 GUSBP6-202ENST00000438529 1198 ntBASIC13.6□□□□□ -0.23
CCL20P78556 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CCL20P78556 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL20P78556 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 AC026271.3-201ENST00000571884 352 ntBASIC13.6□□□□□ -0.23
CCL20P78556 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 TK1-204ENST00000590430 683 ntTSL 3 BASIC13.6□□□□□ -0.23
CCL20P78556 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
CCL20P78556 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CCL20P78556 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CCL20P78556 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL20P78556 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CCL20P78556 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL20P78556 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL20P78556 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CCL20P78556 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL20P78556 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL20P78556 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL20P78556 BX276092.7-203ENST00000637198 1536 ntBASIC13.59□□□□□ -0.23
CCL20P78556 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.59□□□□□ -0.23
CCL20P78556 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
CCL20P78556 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.59□□□□□ -0.23
CCL20P78556 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL20P78556 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
CCL20P78556 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CCL20P78556 AC013268.4-201ENST00000637413 2228 ntBASIC13.59□□□□□ -0.23
CCL20P78556 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL20P78556 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.59□□□□□ -0.23
CCL20P78556 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
CCL20P78556 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL20P78556 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL20P78556 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.59□□□□□ -0.23
CCL20P78556 KRT16P1-201ENST00000399124 1418 ntBASIC13.59□□□□□ -0.23
CCL20P78556 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL20P78556 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL20P78556 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL20P78556 SLC29A4P1-201ENST00000398760 971 ntBASIC13.59□□□□□ -0.23
CCL20P78556 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC13.59□□□□□ -0.23
CCL20P78556 AC026185.1-201ENST00000445748 174 ntBASIC13.59□□□□□ -0.23
CCL20P78556 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.59□□□□□ -0.23
CCL20P78556 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC13.59□□□□□ -0.23
CCL20P78556 B3GAT3P1-201ENST00000471720 806 ntBASIC13.59□□□□□ -0.23
CCL20P78556 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL20P78556 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCL20P78556 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.59□□□□□ -0.23
CCL20P78556 AP000692.2-201ENST00000608391 879 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms