Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SEC61A1P61619 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.16■□□□□ 0.02
SEC61A1P61619 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SEC61A1P61619 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SEC61A1P61619 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.16■□□□□ 0.02
SEC61A1P61619 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SEC61A1P61619 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
SEC61A1P61619 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SEC61A1P61619 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SEC61A1P61619 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SEC61A1P61619 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SEC61A1P61619 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SEC61A1P61619 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SEC61A1P61619 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SEC61A1P61619 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SEC61A1P61619 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.16■□□□□ 0.02
SEC61A1P61619 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.16■□□□□ 0.02
SEC61A1P61619 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.16■□□□□ 0.02
SEC61A1P61619 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.16■□□□□ 0.02
SEC61A1P61619 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.16■□□□□ 0.02
SEC61A1P61619 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
SEC61A1P61619 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.16■□□□□ 0.02
SEC61A1P61619 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SEC61A1P61619 AC004263.2-201ENST00000617183 678 ntBASIC15.16■□□□□ 0.02
SEC61A1P61619 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
SEC61A1P61619 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SEC61A1P61619 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.16■□□□□ 0.02
SEC61A1P61619 AC068418.2-201ENST00000577309 3703 ntBASIC15.16■□□□□ 0.02
SEC61A1P61619 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SEC61A1P61619 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SEC61A1P61619 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SEC61A1P61619 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SEC61A1P61619 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SEC61A1P61619 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
SEC61A1P61619 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SEC61A1P61619 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
SEC61A1P61619 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SEC61A1P61619 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.15■□□□□ 0.02
SEC61A1P61619 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.15■□□□□ 0.02
SEC61A1P61619 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SEC61A1P61619 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.15■□□□□ 0.02
SEC61A1P61619 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.15■□□□□ 0.02
SEC61A1P61619 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SEC61A1P61619 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SEC61A1P61619 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.15■□□□□ 0.02
SEC61A1P61619 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
SEC61A1P61619 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
SEC61A1P61619 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.15■□□□□ 0.02
SEC61A1P61619 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SEC61A1P61619 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SEC61A1P61619 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
SEC61A1P61619 AC093010.1-201ENST00000473625 1624 ntBASIC15.15■□□□□ 0.02
SEC61A1P61619 AL024508.2-201ENST00000607749 1894 ntBASIC15.15■□□□□ 0.02
SEC61A1P61619 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SEC61A1P61619 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.15■□□□□ 0.02
SEC61A1P61619 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.15■□□□□ 0.02
SEC61A1P61619 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SEC61A1P61619 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SEC61A1P61619 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.15■□□□□ 0.02
SEC61A1P61619 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.15■□□□□ 0.02
SEC61A1P61619 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SEC61A1P61619 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.15■□□□□ 0.02
SEC61A1P61619 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.15■□□□□ 0.02
SEC61A1P61619 TPSP2-201ENST00000561760 610 ntBASIC15.15■□□□□ 0.02
SEC61A1P61619 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SEC61A1P61619 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.15■□□□□ 0.02
SEC61A1P61619 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SEC61A1P61619 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SEC61A1P61619 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.15■□□□□ 0.02
SEC61A1P61619 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SEC61A1P61619 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SEC61A1P61619 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.15■□□□□ 0.02
SEC61A1P61619 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SEC61A1P61619 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SEC61A1P61619 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SEC61A1P61619 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.15■□□□□ 0.02
SEC61A1P61619 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SEC61A1P61619 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SEC61A1P61619 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SEC61A1P61619 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SEC61A1P61619 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SEC61A1P61619 AL138688.1-201ENST00000624851 1594 ntBASIC15.15■□□□□ 0.02
SEC61A1P61619 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SEC61A1P61619 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SEC61A1P61619 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SEC61A1P61619 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.14■□□□□ 0.01
SEC61A1P61619 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SEC61A1P61619 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.14■□□□□ 0.01
SEC61A1P61619 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SEC61A1P61619 AL353692.3-201ENST00000407031 1396 ntBASIC15.14■□□□□ 0.01
SEC61A1P61619 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
SEC61A1P61619 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.14■□□□□ 0.01
SEC61A1P61619 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SEC61A1P61619 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SEC61A1P61619 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SEC61A1P61619 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.14■□□□□ 0.01
SEC61A1P61619 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SEC61A1P61619 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.14■□□□□ 0.01
SEC61A1P61619 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms