Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN20P56880 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN20P56880 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN20P56880 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CLDN20P56880 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN20P56880 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN20P56880 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN20P56880 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN20P56880 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN20P56880 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN20P56880 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN20P56880 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN20P56880 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN20P56880 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN20P56880 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CLDN20P56880 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN20P56880 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN20P56880 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN20P56880 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
CLDN20P56880 RBM17P3-201ENST00000417687 1192 ntBASIC15.85■□□□□ 0.13
CLDN20P56880 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.85■□□□□ 0.13
CLDN20P56880 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.85■□□□□ 0.13
CLDN20P56880 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CLDN20P56880 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN20P56880 AP000867.4-201ENST00000641616 219 ntBASIC15.85■□□□□ 0.13
CLDN20P56880 AL356309.3-201ENST00000624132 1934 ntBASIC15.85■□□□□ 0.13
CLDN20P56880 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN20P56880 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN20P56880 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN20P56880 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN20P56880 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN20P56880 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN20P56880 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN20P56880 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN20P56880 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN20P56880 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN20P56880 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN20P56880 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN20P56880 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN20P56880 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN20P56880 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.84■□□□□ 0.13
CLDN20P56880 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN20P56880 REXO1L11P-201ENST00000620964 1927 ntBASIC15.84■□□□□ 0.13
CLDN20P56880 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CLDN20P56880 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CLDN20P56880 AL049757.1-201ENST00000616842 1596 ntBASIC15.84■□□□□ 0.13
CLDN20P56880 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CLDN20P56880 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.84■□□□□ 0.13
CLDN20P56880 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN20P56880 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN20P56880 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN20P56880 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN20P56880 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN20P56880 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN20P56880 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CLDN20P56880 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN20P56880 AC026396.1-201ENST00000419388 421 ntBASIC15.84■□□□□ 0.13
CLDN20P56880 FGFR3P6-201ENST00000457012 610 ntBASIC15.84■□□□□ 0.13
CLDN20P56880 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.84■□□□□ 0.13
CLDN20P56880 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CLDN20P56880 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN20P56880 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.84■□□□□ 0.13
CLDN20P56880 AC019129.2-201ENST00000609837 1235 ntBASIC15.84■□□□□ 0.13
CLDN20P56880 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CLDN20P56880 AD001527.2-201ENST00000622994 785 ntBASIC15.84■□□□□ 0.13
CLDN20P56880 TP73-AS1-207ENST00000624167 988 ntBASIC15.84■□□□□ 0.13
CLDN20P56880 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN20P56880 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
CLDN20P56880 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CLDN20P56880 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN20P56880 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN20P56880 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CLDN20P56880 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN20P56880 KRT8P10-201ENST00000450021 1447 ntBASIC15.84■□□□□ 0.13
CLDN20P56880 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN20P56880 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CLDN20P56880 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN20P56880 AL513477.1-201ENST00000602865 2407 ntBASIC15.84■□□□□ 0.13
CLDN20P56880 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN20P56880 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN20P56880 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN20P56880 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN20P56880 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.83■□□□□ 0.13
CLDN20P56880 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLDN20P56880 MST1L-201ENST00000442552 2185 ntBASIC15.83■□□□□ 0.13
CLDN20P56880 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLDN20P56880 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CLDN20P56880 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN20P56880 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN20P56880 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN20P56880 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CLDN20P56880 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CLDN20P56880 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.83■□□□□ 0.12
CLDN20P56880 AL160237.2-201ENST00000556165 472 ntBASIC15.83■□□□□ 0.12
CLDN20P56880 AC109462.3-201ENST00000573934 613 ntBASIC15.83■□□□□ 0.12
CLDN20P56880 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.83■□□□□ 0.12
CLDN20P56880 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.83■□□□□ 0.12
CLDN20P56880 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN20P56880 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CLDN20P56880 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms