Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
AP1S2P56377 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
AP1S2P56377 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.79■□□□□ 0.28
AP1S2P56377 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.79■□□□□ 0.28
AP1S2P56377 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.79■□□□□ 0.28
AP1S2P56377 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.79■□□□□ 0.28
AP1S2P56377 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.79■□□□□ 0.28
AP1S2P56377 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
AP1S2P56377 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.79■□□□□ 0.28
AP1S2P56377 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.79■□□□□ 0.28
AP1S2P56377 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.79■□□□□ 0.28
AP1S2P56377 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.79■□□□□ 0.28
AP1S2P56377 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.79■□□□□ 0.28
AP1S2P56377 MTDHP3-201ENST00000594186 672 ntBASIC16.79■□□□□ 0.28
AP1S2P56377 CLEC4GP1-201ENST00000596555 870 ntBASIC16.79■□□□□ 0.28
AP1S2P56377 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
AP1S2P56377 AC012313.1-201ENST00000593393 3059 ntBASIC16.79■□□□□ 0.28
AP1S2P56377 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.79■□□□□ 0.28
AP1S2P56377 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.79■□□□□ 0.28
AP1S2P56377 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.78■□□□□ 0.28
AP1S2P56377 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
AP1S2P56377 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.78■□□□□ 0.28
AP1S2P56377 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
AP1S2P56377 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 LINC00982-205ENST00000420957 435 ntBASIC16.78■□□□□ 0.28
AP1S2P56377 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.78■□□□□ 0.28
AP1S2P56377 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.78■□□□□ 0.28
AP1S2P56377 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.78■□□□□ 0.28
AP1S2P56377 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.78■□□□□ 0.28
AP1S2P56377 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.78■□□□□ 0.28
AP1S2P56377 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.78■□□□□ 0.28
AP1S2P56377 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
AP1S2P56377 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.78■□□□□ 0.28
AP1S2P56377 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.78■□□□□ 0.28
AP1S2P56377 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 NCF1C-201ENST00000438382 1427 ntBASIC16.78■□□□□ 0.28
AP1S2P56377 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
AP1S2P56377 PKD1P5-201ENST00000532415 10291 ntBASIC16.78■□□□□ 0.28
AP1S2P56377 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S2P56377 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S2P56377 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S2P56377 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.77■□□□□ 0.28
AP1S2P56377 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S2P56377 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
AP1S2P56377 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S2P56377 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S2P56377 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
AP1S2P56377 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.77■□□□□ 0.28
AP1S2P56377 AC060834.1-201ENST00000443027 2032 ntBASIC16.77■□□□□ 0.28
AP1S2P56377 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S2P56377 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms