Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CASP4P49662 FRMD8P1-201ENST00000440433 1524 ntBASIC18.79■□□□□ 0.6
CASP4P49662 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CASP4P49662 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CASP4P49662 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CASP4P49662 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CASP4P49662 AL121761.2-201ENST00000598007 1648 ntBASIC18.79■□□□□ 0.6
CASP4P49662 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP4P49662 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CASP4P49662 NKILA-202ENST00000614771 2598 ntBASIC18.79■□□□□ 0.6
CASP4P49662 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CASP4P49662 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP4P49662 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CASP4P49662 AC021087.4-201ENST00000563761 564 ntBASIC18.79■□□□□ 0.6
CASP4P49662 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.79■□□□□ 0.6
CASP4P49662 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.79■□□□□ 0.6
CASP4P49662 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP4P49662 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CASP4P49662 AC011676.5-201ENST00000624864 2660 ntBASIC18.79■□□□□ 0.6
CASP4P49662 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP4P49662 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP4P49662 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CASP4P49662 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CASP4P49662 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CASP4P49662 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP4P49662 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP4P49662 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASP4P49662 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP4P49662 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP4P49662 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CASP4P49662 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP4P49662 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CASP4P49662 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CASP4P49662 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.78■□□□□ 0.6
CASP4P49662 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.78■□□□□ 0.6
CASP4P49662 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CASP4P49662 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP4P49662 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP4P49662 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.78■□□□□ 0.6
CASP4P49662 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.78■□□□□ 0.6
CASP4P49662 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.78■□□□□ 0.6
CASP4P49662 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CASP4P49662 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP4P49662 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CASP4P49662 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.78■□□□□ 0.6
CASP4P49662 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP4P49662 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.78■□□□□ 0.6
CASP4P49662 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.78■□□□□ 0.6
CASP4P49662 MTDHP4-201ENST00000600287 670 ntBASIC18.78■□□□□ 0.6
CASP4P49662 AC025062.2-201ENST00000605477 670 ntBASIC18.78■□□□□ 0.6
CASP4P49662 AL353135.1-201ENST00000606729 504 ntBASIC18.78■□□□□ 0.6
CASP4P49662 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.78■□□□□ 0.6
CASP4P49662 AL031008.1-201ENST00000619963 541 ntBASIC18.78■□□□□ 0.6
CASP4P49662 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CASP4P49662 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CASP4P49662 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CASP4P49662 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP4P49662 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CASP4P49662 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CASP4P49662 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CASP4P49662 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP4P49662 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CASP4P49662 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP4P49662 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASP4P49662 GPR89P-201ENST00000407924 1495 ntBASIC18.77■□□□□ 0.6
CASP4P49662 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASP4P49662 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CASP4P49662 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CASP4P49662 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CASP4P49662 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
CASP4P49662 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASP4P49662 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASP4P49662 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASP4P49662 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASP4P49662 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CASP4P49662 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
CASP4P49662 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CASP4P49662 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.77■□□□□ 0.6
CASP4P49662 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CASP4P49662 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CASP4P49662 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.77■□□□□ 0.6
CASP4P49662 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.77■□□□□ 0.6
CASP4P49662 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.77■□□□□ 0.6
CASP4P49662 AL121912.1-201ENST00000603683 238 ntBASIC18.77■□□□□ 0.6
CASP4P49662 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.77■□□□□ 0.6
CASP4P49662 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASP4P49662 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASP4P49662 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CASP4P49662 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.77■□□□□ 0.6
CASP4P49662 AC105020.1-201ENST00000435356 2205 ntBASIC18.77■□□□□ 0.59
CASP4P49662 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.59
CASP4P49662 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CASP4P49662 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CASP4P49662 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.77■□□□□ 0.59
CASP4P49662 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.77■□□□□ 0.59
CASP4P49662 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CASP4P49662 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CASP4P49662 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CASP4P49662 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CASP4P49662 AL590787.1-201ENST00000568856 1315 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms