Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MTHFRP42898 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MTHFRP42898 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
MTHFRP42898 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.99■□□□□ 0.47
MTHFRP42898 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.99■□□□□ 0.47
MTHFRP42898 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.99■□□□□ 0.47
MTHFRP42898 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.99■□□□□ 0.47
MTHFRP42898 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
MTHFRP42898 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.99■□□□□ 0.47
MTHFRP42898 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
MTHFRP42898 NOC2LP1-202ENST00000452600 2235 ntBASIC17.99■□□□□ 0.47
MTHFRP42898 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.99■□□□□ 0.47
MTHFRP42898 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.99■□□□□ 0.47
MTHFRP42898 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
MTHFRP42898 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
MTHFRP42898 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.99■□□□□ 0.47
MTHFRP42898 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
MTHFRP42898 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.99■□□□□ 0.47
MTHFRP42898 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.99■□□□□ 0.47
MTHFRP42898 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.99■□□□□ 0.47
MTHFRP42898 RN7SL589P-201ENST00000481268 310 ntBASIC17.99■□□□□ 0.47
MTHFRP42898 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.99■□□□□ 0.47
MTHFRP42898 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.99■□□□□ 0.47
MTHFRP42898 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.99■□□□□ 0.47
MTHFRP42898 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.99■□□□□ 0.47
MTHFRP42898 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.99■□□□□ 0.47
MTHFRP42898 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
MTHFRP42898 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 BCL2-203ENST00000589955 5011 ntBASIC17.99■□□□□ 0.47
MTHFRP42898 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MTHFRP42898 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
MTHFRP42898 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.98■□□□□ 0.47
MTHFRP42898 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MTHFRP42898 AC063926.2-201ENST00000623766 1308 ntBASIC17.98■□□□□ 0.47
MTHFRP42898 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
MTHFRP42898 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
MTHFRP42898 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MTHFRP42898 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
MTHFRP42898 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.98■□□□□ 0.47
MTHFRP42898 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MTHFRP42898 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.98■□□□□ 0.47
MTHFRP42898 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MTHFRP42898 AC140658.5-201ENST00000438532 169 ntBASIC17.98■□□□□ 0.47
MTHFRP42898 AL592309.1-201ENST00000443127 649 ntBASIC17.98■□□□□ 0.47
MTHFRP42898 AC069335.1-201ENST00000489972 472 ntBASIC17.98■□□□□ 0.47
MTHFRP42898 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.98■□□□□ 0.47
MTHFRP42898 KRT8P48-201ENST00000515599 1220 ntBASIC17.98■□□□□ 0.47
MTHFRP42898 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.98■□□□□ 0.47
MTHFRP42898 AL512356.2-201ENST00000546955 174 ntBASIC17.98■□□□□ 0.47
MTHFRP42898 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MTHFRP42898 AL645728.2-201ENST00000641974 660 ntBASIC17.98■□□□□ 0.47
MTHFRP42898 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MTHFRP42898 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
MTHFRP42898 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
MTHFRP42898 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.98■□□□□ 0.47
MTHFRP42898 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
MTHFRP42898 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MTHFRP42898 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
MTHFRP42898 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.98■□□□□ 0.47
MTHFRP42898 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.98■□□□□ 0.47
MTHFRP42898 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MTHFRP42898 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.98■□□□□ 0.47
MTHFRP42898 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
MTHFRP42898 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.98■□□□□ 0.47
MTHFRP42898 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MTHFRP42898 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MTHFRP42898 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.97■□□□□ 0.47
MTHFRP42898 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.97■□□□□ 0.47
MTHFRP42898 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MTHFRP42898 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
MTHFRP42898 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.97■□□□□ 0.47
MTHFRP42898 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.97■□□□□ 0.47
MTHFRP42898 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.97■□□□□ 0.47
MTHFRP42898 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.97■□□□□ 0.47
MTHFRP42898 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.97■□□□□ 0.47
MTHFRP42898 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MTHFRP42898 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
MTHFRP42898 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms