Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC21.49■■□□□ 1.03
RFC4P35249 AL662799.1-202ENST00000614205 422 ntBASIC21.49■■□□□ 1.03
RFC4P35249 AC025048.6-201ENST00000634326 1161 ntBASIC21.49■■□□□ 1.03
RFC4P35249 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.49■■□□□ 1.03
RFC4P35249 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFC4P35249 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFC4P35249 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFC4P35249 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.49■■□□□ 1.03
RFC4P35249 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
RFC4P35249 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFC4P35249 TDG-209ENST00000544861 1387 ntTSL 2 BASIC21.48■■□□□ 1.03
RFC4P35249 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC21.48■■□□□ 1.03
RFC4P35249 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFC4P35249 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFC4P35249 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFC4P35249 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC21.48■■□□□ 1.03
RFC4P35249 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFC4P35249 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFC4P35249 MIR346-201ENST00000362234 95 ntBASIC21.48■■□□□ 1.03
RFC4P35249 CD81-202ENST00000381036 880 ntTSL 3 BASIC21.48■■□□□ 1.03
RFC4P35249 PIN1P1-201ENST00000412108 996 ntBASIC21.48■■□□□ 1.03
RFC4P35249 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC21.48■■□□□ 1.03
RFC4P35249 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RFC4P35249 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC21.48■■□□□ 1.03
RFC4P35249 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RFC4P35249 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RFC4P35249 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.48■■□□□ 1.03
RFC4P35249 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RFC4P35249 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RFC4P35249 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFC4P35249 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFC4P35249 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RFC4P35249 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFC4P35249 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFC4P35249 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.47■■□□□ 1.03
RFC4P35249 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFC4P35249 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.47■■□□□ 1.03
RFC4P35249 AL353732.1-201ENST00000569618 1459 ntBASIC21.47■■□□□ 1.03
RFC4P35249 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFC4P35249 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.47■■□□□ 1.03
RFC4P35249 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.47■■□□□ 1.03
RFC4P35249 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFC4P35249 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RFC4P35249 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFC4P35249 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RFC4P35249 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC21.47■■□□□ 1.03
RFC4P35249 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC21.47■■□□□ 1.03
RFC4P35249 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC21.47■■□□□ 1.03
RFC4P35249 SPDYE22P-201ENST00000582158 798 ntBASIC21.47■■□□□ 1.03
RFC4P35249 COQ4-205ENST00000609948 956 ntTSL 2 BASIC21.47■■□□□ 1.03
RFC4P35249 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFC4P35249 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RFC4P35249 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RFC4P35249 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFC4P35249 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFC4P35249 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFC4P35249 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFC4P35249 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.46■■□□□ 1.03
RFC4P35249 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFC4P35249 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.46■■□□□ 1.03
RFC4P35249 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
RFC4P35249 MRPS18AP1-201ENST00000414458 589 ntBASIC21.46■■□□□ 1.03
RFC4P35249 NME2P1-201ENST00000426182 414 ntBASIC21.46■■□□□ 1.03
RFC4P35249 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC21.46■■□□□ 1.03
RFC4P35249 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC21.46■■□□□ 1.03
RFC4P35249 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RFC4P35249 AC027369.6-201ENST00000525520 931 ntBASIC21.46■■□□□ 1.03
RFC4P35249 AL596325.1-201ENST00000563991 1082 ntBASIC21.46■■□□□ 1.03
RFC4P35249 AC009118.2-201ENST00000613275 655 ntBASIC21.46■■□□□ 1.03
RFC4P35249 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFC4P35249 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.46■■□□□ 1.03
RFC4P35249 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC21.46■■□□□ 1.03
RFC4P35249 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFC4P35249 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.46■■□□□ 1.03
RFC4P35249 AP000974.1-201ENST00000623909 2387 ntBASIC21.46■■□□□ 1.03
RFC4P35249 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFC4P35249 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.46■■□□□ 1.03
RFC4P35249 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
RFC4P35249 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
RFC4P35249 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
RFC4P35249 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RFC4P35249 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFC4P35249 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFC4P35249 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFC4P35249 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC21.45■■□□□ 1.02
RFC4P35249 HCG4-201ENST00000418983 998 ntBASIC21.45■■□□□ 1.02
RFC4P35249 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC21.45■■□□□ 1.02
RFC4P35249 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC21.45■■□□□ 1.02
RFC4P35249 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RFC4P35249 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RFC4P35249 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC21.45■■□□□ 1.02
RFC4P35249 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC21.45■■□□□ 1.02
RFC4P35249 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC21.45■■□□□ 1.02
RFC4P35249 COQ9-214ENST00000567933 882 ntTSL 3 BASIC21.45■■□□□ 1.02
RFC4P35249 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC21.45■■□□□ 1.02
RFC4P35249 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
RFC4P35249 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RFC4P35249 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFC4P35249 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFC4P35249 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms