Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
HOXA6P31267 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOXA6P31267 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOXA6P31267 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.85■□□□□ 0.29
HOXA6P31267 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.85■□□□□ 0.29
HOXA6P31267 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.85■□□□□ 0.29
HOXA6P31267 RARRES2P9-201ENST00000565168 469 ntBASIC16.85■□□□□ 0.29
HOXA6P31267 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.85■□□□□ 0.29
HOXA6P31267 AC073389.1-201ENST00000595595 795 ntBASIC16.85■□□□□ 0.29
HOXA6P31267 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.85■□□□□ 0.29
HOXA6P31267 AP001350.2-201ENST00000625104 1094 ntBASIC16.85■□□□□ 0.29
HOXA6P31267 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.85■□□□□ 0.29
HOXA6P31267 TOP3BP1-201ENST00000420768 1380 ntBASIC16.85■□□□□ 0.29
HOXA6P31267 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.85■□□□□ 0.29
HOXA6P31267 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HOXA6P31267 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.85■□□□□ 0.29
HOXA6P31267 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.85■□□□□ 0.29
HOXA6P31267 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.85■□□□□ 0.29
HOXA6P31267 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HOXA6P31267 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOXA6P31267 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HOXA6P31267 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXA6P31267 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HOXA6P31267 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOXA6P31267 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXA6P31267 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
HOXA6P31267 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXA6P31267 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOXA6P31267 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.84■□□□□ 0.29
HOXA6P31267 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HOXA6P31267 AC142381.1-201ENST00000426099 345 ntBASIC16.84■□□□□ 0.29
HOXA6P31267 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.84■□□□□ 0.29
HOXA6P31267 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.84■□□□□ 0.29
HOXA6P31267 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXA6P31267 AC105233.2-201ENST00000523697 349 ntBASIC16.84■□□□□ 0.29
HOXA6P31267 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXA6P31267 AF228730.5-201ENST00000530288 346 ntBASIC16.84■□□□□ 0.29
HOXA6P31267 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.84■□□□□ 0.29
HOXA6P31267 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.84■□□□□ 0.29
HOXA6P31267 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXA6P31267 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXA6P31267 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
HOXA6P31267 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.84■□□□□ 0.29
HOXA6P31267 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.84■□□□□ 0.29
HOXA6P31267 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOXA6P31267 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HOXA6P31267 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA6P31267 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA6P31267 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA6P31267 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA6P31267 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.83■□□□□ 0.28
HOXA6P31267 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA6P31267 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.83■□□□□ 0.28
HOXA6P31267 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
HOXA6P31267 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HOXA6P31267 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.83■□□□□ 0.28
HOXA6P31267 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
HOXA6P31267 KRT17P7-201ENST00000451704 1104 ntBASIC16.83■□□□□ 0.28
HOXA6P31267 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXA6P31267 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.83■□□□□ 0.28
HOXA6P31267 TP53TG3HP-202ENST00000569755 579 ntBASIC16.83■□□□□ 0.28
HOXA6P31267 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXA6P31267 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXA6P31267 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.83■□□□□ 0.28
HOXA6P31267 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
HOXA6P31267 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.83■□□□□ 0.28
HOXA6P31267 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA6P31267 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA6P31267 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.83■□□□□ 0.28
HOXA6P31267 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.83■□□□□ 0.28
HOXA6P31267 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA6P31267 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA6P31267 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXA6P31267 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HOXA6P31267 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
HOXA6P31267 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HOXA6P31267 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXA6P31267 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA6P31267 AC016027.1-202ENST00000607927 1699 ntBASIC16.82■□□□□ 0.28
HOXA6P31267 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXA6P31267 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HOXA6P31267 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
HOXA6P31267 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA6P31267 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA6P31267 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HOXA6P31267 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA6P31267 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA6P31267 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXA6P31267 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXA6P31267 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXA6P31267 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXA6P31267 ARSEP1-201ENST00000420443 635 ntBASIC16.82■□□□□ 0.28
HOXA6P31267 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA6P31267 AC009477.1-201ENST00000452936 217 ntBASIC16.82■□□□□ 0.28
HOXA6P31267 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXA6P31267 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXA6P31267 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXA6P31267 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXA6P31267 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.82■□□□□ 0.28
HOXA6P31267 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms