Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
SP9P0CG40 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SP9P0CG40 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SP9P0CG40 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SP9P0CG40 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.78■□□□□ 0.28
SP9P0CG40 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SP9P0CG40 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SP9P0CG40 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.78■□□□□ 0.28
SP9P0CG40 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SP9P0CG40 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SP9P0CG40 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.78■□□□□ 0.28
SP9P0CG40 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.78■□□□□ 0.28
SP9P0CG40 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.78■□□□□ 0.28
SP9P0CG40 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SP9P0CG40 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.78■□□□□ 0.28
SP9P0CG40 AC008494.3-201ENST00000606615 944 ntBASIC16.78■□□□□ 0.28
SP9P0CG40 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SP9P0CG40 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SP9P0CG40 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
SP9P0CG40 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.78■□□□□ 0.28
SP9P0CG40 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.78■□□□□ 0.28
SP9P0CG40 CETN4P-206ENST00000642099 2168 ntBASIC16.78■□□□□ 0.28
SP9P0CG40 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SP9P0CG40 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.78■□□□□ 0.28
SP9P0CG40 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SP9P0CG40 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SP9P0CG40 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.78■□□□□ 0.28
SP9P0CG40 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SP9P0CG40 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SP9P0CG40 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SP9P0CG40 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SP9P0CG40 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SP9P0CG40 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
SP9P0CG40 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SP9P0CG40 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SP9P0CG40 AC116562.4-201ENST00000641316 2276 ntBASIC16.77■□□□□ 0.28
SP9P0CG40 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SP9P0CG40 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.77■□□□□ 0.28
SP9P0CG40 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SP9P0CG40 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SP9P0CG40 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SP9P0CG40 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SP9P0CG40 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SP9P0CG40 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SP9P0CG40 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.77■□□□□ 0.28
SP9P0CG40 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.77■□□□□ 0.28
SP9P0CG40 RPL37AP1-201ENST00000412502 279 ntBASIC16.77■□□□□ 0.28
SP9P0CG40 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SP9P0CG40 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.77■□□□□ 0.28
SP9P0CG40 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SP9P0CG40 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.77■□□□□ 0.28
SP9P0CG40 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SP9P0CG40 FAM8A2P-201ENST00000528813 1142 ntBASIC16.77■□□□□ 0.28
SP9P0CG40 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.77■□□□□ 0.28
SP9P0CG40 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SP9P0CG40 CHCHD2P3-201ENST00000603038 451 ntBASIC16.77■□□□□ 0.28
SP9P0CG40 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SP9P0CG40 AL589739.1-201ENST00000607720 493 ntBASIC16.77■□□□□ 0.28
SP9P0CG40 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.77■□□□□ 0.28
SP9P0CG40 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.77■□□□□ 0.27
SP9P0CG40 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.77■□□□□ 0.27
SP9P0CG40 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SP9P0CG40 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.77■□□□□ 0.27
SP9P0CG40 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SP9P0CG40 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SP9P0CG40 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SP9P0CG40 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.77■□□□□ 0.27
SP9P0CG40 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.76■□□□□ 0.27
SP9P0CG40 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SP9P0CG40 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SP9P0CG40 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SP9P0CG40 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SP9P0CG40 AL133338.1-201ENST00000565695 1517 ntBASIC16.76■□□□□ 0.27
SP9P0CG40 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SP9P0CG40 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SP9P0CG40 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SP9P0CG40 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SP9P0CG40 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SP9P0CG40 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SP9P0CG40 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.76■□□□□ 0.27
SP9P0CG40 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.76■□□□□ 0.27
SP9P0CG40 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.76■□□□□ 0.27
SP9P0CG40 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.76■□□□□ 0.27
SP9P0CG40 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SP9P0CG40 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.76■□□□□ 0.27
SP9P0CG40 AC092552.1-201ENST00000547243 906 ntBASIC16.76■□□□□ 0.27
SP9P0CG40 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SP9P0CG40 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
SP9P0CG40 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
SP9P0CG40 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.76■□□□□ 0.27
SP9P0CG40 WASH4P-201ENST00000564273 1246 ntBASIC16.76■□□□□ 0.27
SP9P0CG40 MIR4259-201ENST00000584466 101 ntBASIC16.76■□□□□ 0.27
SP9P0CG40 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SP9P0CG40 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SP9P0CG40 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SP9P0CG40 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SP9P0CG40 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SP9P0CG40 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
SP9P0CG40 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SP9P0CG40 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms