Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.7■□□□□ 0.42
TOP3BO95985 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TOP3BO95985 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TOP3BO95985 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP3BO95985 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP3BO95985 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TOP3BO95985 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TOP3BO95985 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TOP3BO95985 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TOP3BO95985 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP3BO95985 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP3BO95985 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TOP3BO95985 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP3BO95985 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP3BO95985 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP3BO95985 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP3BO95985 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TOP3BO95985 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP3BO95985 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TOP3BO95985 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TOP3BO95985 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TOP3BO95985 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.69■□□□□ 0.42
TOP3BO95985 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.69■□□□□ 0.42
TOP3BO95985 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP3BO95985 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.69■□□□□ 0.42
TOP3BO95985 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.69■□□□□ 0.42
TOP3BO95985 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TOP3BO95985 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP3BO95985 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.69■□□□□ 0.42
TOP3BO95985 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP3BO95985 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP3BO95985 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.69■□□□□ 0.42
TOP3BO95985 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.69■□□□□ 0.42
TOP3BO95985 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP3BO95985 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.69■□□□□ 0.42
TOP3BO95985 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TOP3BO95985 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP3BO95985 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.69■□□□□ 0.42
TOP3BO95985 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP3BO95985 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TOP3BO95985 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TOP3BO95985 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TOP3BO95985 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TOP3BO95985 KRT18P28-201ENST00000453838 1332 ntBASIC17.69■□□□□ 0.42
TOP3BO95985 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TOP3BO95985 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP3BO95985 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.69■□□□□ 0.42
TOP3BO95985 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP3BO95985 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TOP3BO95985 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP3BO95985 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TOP3BO95985 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP3BO95985 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.68■□□□□ 0.42
TOP3BO95985 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TOP3BO95985 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP3BO95985 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP3BO95985 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP3BO95985 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP3BO95985 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP3BO95985 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP3BO95985 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TOP3BO95985 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP3BO95985 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP3BO95985 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.68■□□□□ 0.42
TOP3BO95985 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
TOP3BO95985 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TOP3BO95985 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
TOP3BO95985 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TOP3BO95985 AC092910.1-201ENST00000482027 1129 ntBASIC17.68■□□□□ 0.42
TOP3BO95985 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.68■□□□□ 0.42
TOP3BO95985 AC024563.2-201ENST00000603282 481 ntBASIC17.68■□□□□ 0.42
TOP3BO95985 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.68■□□□□ 0.42
TOP3BO95985 AC114341.1-201ENST00000618070 349 ntBASIC17.68■□□□□ 0.42
TOP3BO95985 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.68■□□□□ 0.42
TOP3BO95985 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.68■□□□□ 0.42
TOP3BO95985 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TOP3BO95985 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP3BO95985 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP3BO95985 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP3BO95985 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP3BO95985 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TOP3BO95985 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP3BO95985 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP3BO95985 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TOP3BO95985 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TOP3BO95985 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.67■□□□□ 0.42
TOP3BO95985 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP3BO95985 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TOP3BO95985 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TOP3BO95985 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP3BO95985 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP3BO95985 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.67■□□□□ 0.42
TOP3BO95985 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TOP3BO95985 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP3BO95985 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP3BO95985 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP3BO95985 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TOP3BO95985 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TOP3BO95985 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP3BO95985 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms