Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.22■□□□□ 0.03
KDM4BO94953 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
KDM4BO94953 AC010203.1-204ENST00000548782 407 ntBASIC15.22■□□□□ 0.03
KDM4BO94953 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.22■□□□□ 0.03
KDM4BO94953 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.22■□□□□ 0.03
KDM4BO94953 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.22■□□□□ 0.03
KDM4BO94953 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KDM4BO94953 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KDM4BO94953 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.22■□□□□ 0.03
KDM4BO94953 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.22■□□□□ 0.03
KDM4BO94953 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
KDM4BO94953 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
KDM4BO94953 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KDM4BO94953 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.22■□□□□ 0.03
KDM4BO94953 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.22■□□□□ 0.03
KDM4BO94953 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
KDM4BO94953 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.22■□□□□ 0.03
KDM4BO94953 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KDM4BO94953 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
KDM4BO94953 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.22■□□□□ 0.03
KDM4BO94953 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KDM4BO94953 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
KDM4BO94953 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.22■□□□□ 0.03
KDM4BO94953 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KDM4BO94953 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KDM4BO94953 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
KDM4BO94953 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KDM4BO94953 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.21■□□□□ 0.03
KDM4BO94953 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KDM4BO94953 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KDM4BO94953 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KDM4BO94953 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KDM4BO94953 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KDM4BO94953 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.21■□□□□ 0.03
KDM4BO94953 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
KDM4BO94953 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
KDM4BO94953 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KDM4BO94953 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.21■□□□□ 0.03
KDM4BO94953 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KDM4BO94953 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
KDM4BO94953 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.21■□□□□ 0.03
KDM4BO94953 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
KDM4BO94953 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.21■□□□□ 0.03
KDM4BO94953 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KDM4BO94953 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KDM4BO94953 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.21■□□□□ 0.03
KDM4BO94953 KRT18P65-201ENST00000439811 1286 ntBASIC15.21■□□□□ 0.03
KDM4BO94953 ATP5G1P1-201ENST00000448724 379 ntBASIC15.21■□□□□ 0.03
KDM4BO94953 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.21■□□□□ 0.03
KDM4BO94953 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.21■□□□□ 0.03
KDM4BO94953 AL136038.4-201ENST00000603606 1261 ntBASIC15.21■□□□□ 0.03
KDM4BO94953 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.21■□□□□ 0.03
KDM4BO94953 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KDM4BO94953 AC092850.2-201ENST00000623821 2697 ntBASIC15.21■□□□□ 0.03
KDM4BO94953 AL391807.1-203ENST00000604392 2365 ntBASIC15.21■□□□□ 0.03
KDM4BO94953 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
KDM4BO94953 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KDM4BO94953 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.21■□□□□ 0.03
KDM4BO94953 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
KDM4BO94953 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KDM4BO94953 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
KDM4BO94953 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
KDM4BO94953 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.21■□□□□ 0.02
KDM4BO94953 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.21■□□□□ 0.02
KDM4BO94953 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
KDM4BO94953 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
KDM4BO94953 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.21■□□□□ 0.02
KDM4BO94953 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
KDM4BO94953 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
KDM4BO94953 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.21■□□□□ 0.02
KDM4BO94953 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
KDM4BO94953 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM4BO94953 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.2■□□□□ 0.02
KDM4BO94953 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
KDM4BO94953 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.2■□□□□ 0.02
KDM4BO94953 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.2■□□□□ 0.02
KDM4BO94953 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KDM4BO94953 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM4BO94953 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM4BO94953 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM4BO94953 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM4BO94953 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM4BO94953 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM4BO94953 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.2■□□□□ 0.02
KDM4BO94953 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
KDM4BO94953 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.2■□□□□ 0.02
KDM4BO94953 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.2■□□□□ 0.02
KDM4BO94953 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM4BO94953 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.2■□□□□ 0.02
KDM4BO94953 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM4BO94953 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KDM4BO94953 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.2■□□□□ 0.02
KDM4BO94953 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KDM4BO94953 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.2■□□□□ 0.02
KDM4BO94953 DDX43P3-201ENST00000441064 443 ntBASIC15.2■□□□□ 0.02
KDM4BO94953 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.2■□□□□ 0.02
KDM4BO94953 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.2■□□□□ 0.02
KDM4BO94953 AL441883.1-201ENST00000566170 1045 ntBASIC15.2■□□□□ 0.02
KDM4BO94953 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.2■□□□□ 0.02
KDM4BO94953 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms