Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
ZNF253O75346 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF253O75346 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF253O75346 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC13.5□□□□□ -0.25
ZNF253O75346 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.5□□□□□ -0.25
ZNF253O75346 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.5□□□□□ -0.25
ZNF253O75346 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF253O75346 BX276092.7-203ENST00000637198 1536 ntBASIC13.5□□□□□ -0.25
ZNF253O75346 AC007326.2-201ENST00000624224 7579 ntBASIC13.5□□□□□ -0.25
ZNF253O75346 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF253O75346 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.5□□□□□ -0.25
ZNF253O75346 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF253O75346 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.5□□□□□ -0.25
ZNF253O75346 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
ZNF253O75346 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF253O75346 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.5□□□□□ -0.25
ZNF253O75346 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF253O75346 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF253O75346 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.5□□□□□ -0.25
ZNF253O75346 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.5□□□□□ -0.25
ZNF253O75346 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
ZNF253O75346 AC024563.2-201ENST00000603282 481 ntBASIC13.5□□□□□ -0.25
ZNF253O75346 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF253O75346 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
ZNF253O75346 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF253O75346 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ZNF253O75346 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.5□□□□□ -0.25
ZNF253O75346 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.5□□□□□ -0.25
ZNF253O75346 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF253O75346 REXO1L11P-201ENST00000620964 1927 ntBASIC13.5□□□□□ -0.25
ZNF253O75346 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF253O75346 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF253O75346 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
ZNF253O75346 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ZNF253O75346 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ZNF253O75346 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.5□□□□□ -0.25
ZNF253O75346 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
ZNF253O75346 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.5□□□□□ -0.25
ZNF253O75346 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF253O75346 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.5□□□□□ -0.25
ZNF253O75346 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ZNF253O75346 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ZNF253O75346 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.5□□□□□ -0.25
ZNF253O75346 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF253O75346 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF253O75346 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF253O75346 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF253O75346 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF253O75346 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ZNF253O75346 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF253O75346 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.49□□□□□ -0.25
ZNF253O75346 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF253O75346 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF253O75346 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF253O75346 PCDHB17P-201ENST00000539533 2393 ntBASIC13.49□□□□□ -0.25
ZNF253O75346 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF253O75346 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF253O75346 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF253O75346 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF253O75346 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF253O75346 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.49□□□□□ -0.25
ZNF253O75346 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF253O75346 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC13.49□□□□□ -0.25
ZNF253O75346 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF253O75346 AC005104.2-201ENST00000427818 678 ntBASIC13.49□□□□□ -0.25
ZNF253O75346 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.49□□□□□ -0.25
ZNF253O75346 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF253O75346 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.49□□□□□ -0.25
ZNF253O75346 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.49□□□□□ -0.25
ZNF253O75346 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.49□□□□□ -0.25
ZNF253O75346 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.49□□□□□ -0.25
ZNF253O75346 AL355075.4-201ENST00000554988 638 ntBASIC13.49□□□□□ -0.25
ZNF253O75346 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC13.49□□□□□ -0.25
ZNF253O75346 FAM87A-204ENST00000613235 858 ntBASIC13.49□□□□□ -0.25
ZNF253O75346 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.49□□□□□ -0.25
ZNF253O75346 AL157888.1-201ENST00000631930 593 ntBASIC13.49□□□□□ -0.25
ZNF253O75346 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF253O75346 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
ZNF253O75346 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF253O75346 AL136379.1-201ENST00000623471 2642 ntBASIC13.49□□□□□ -0.25
ZNF253O75346 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF253O75346 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF253O75346 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.49□□□□□ -0.25
ZNF253O75346 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
ZNF253O75346 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF253O75346 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
ZNF253O75346 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF253O75346 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.49□□□□□ -0.25
ZNF253O75346 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF253O75346 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF253O75346 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF253O75346 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.48□□□□□ -0.25
ZNF253O75346 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
ZNF253O75346 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.48□□□□□ -0.25
ZNF253O75346 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF253O75346 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.48□□□□□ -0.25
ZNF253O75346 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF253O75346 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
ZNF253O75346 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.48□□□□□ -0.25
ZNF253O75346 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms