Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CNOT3O75175 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
CNOT3O75175 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.8■□□□□ 0.28
CNOT3O75175 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.8■□□□□ 0.28
CNOT3O75175 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.8■□□□□ 0.28
CNOT3O75175 AL355877.3-201ENST00000622820 899 ntBASIC16.8■□□□□ 0.28
CNOT3O75175 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT3O75175 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT3O75175 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.8■□□□□ 0.28
CNOT3O75175 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CNOT3O75175 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT3O75175 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT3O75175 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT3O75175 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT3O75175 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.8■□□□□ 0.28
CNOT3O75175 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT3O75175 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT3O75175 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.8■□□□□ 0.28
CNOT3O75175 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT3O75175 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT3O75175 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT3O75175 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT3O75175 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT3O75175 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CNOT3O75175 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.79■□□□□ 0.28
CNOT3O75175 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT3O75175 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT3O75175 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT3O75175 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CNOT3O75175 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT3O75175 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT3O75175 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.79■□□□□ 0.28
CNOT3O75175 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT3O75175 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT3O75175 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.79■□□□□ 0.28
CNOT3O75175 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.79■□□□□ 0.28
CNOT3O75175 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT3O75175 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.79■□□□□ 0.28
CNOT3O75175 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CNOT3O75175 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT3O75175 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.79■□□□□ 0.28
CNOT3O75175 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.79■□□□□ 0.28
CNOT3O75175 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
CNOT3O75175 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CNOT3O75175 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT3O75175 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CNOT3O75175 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT3O75175 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CNOT3O75175 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT3O75175 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CNOT3O75175 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT3O75175 AL645608.8-201ENST00000606034 2086 ntBASIC16.79■□□□□ 0.28
CNOT3O75175 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT3O75175 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.79■□□□□ 0.28
CNOT3O75175 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.79■□□□□ 0.28
CNOT3O75175 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.79■□□□□ 0.28
CNOT3O75175 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT3O75175 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT3O75175 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT3O75175 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT3O75175 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT3O75175 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.78■□□□□ 0.28
CNOT3O75175 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT3O75175 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT3O75175 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
CNOT3O75175 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CNOT3O75175 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CNOT3O75175 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT3O75175 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT3O75175 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
CNOT3O75175 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT3O75175 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.78■□□□□ 0.28
CNOT3O75175 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.78■□□□□ 0.28
CNOT3O75175 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
CNOT3O75175 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.78■□□□□ 0.28
CNOT3O75175 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.78■□□□□ 0.28
CNOT3O75175 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.78■□□□□ 0.28
CNOT3O75175 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT3O75175 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.78■□□□□ 0.28
CNOT3O75175 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.78■□□□□ 0.28
CNOT3O75175 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.78■□□□□ 0.28
CNOT3O75175 MTDHP3-201ENST00000594186 672 ntBASIC16.78■□□□□ 0.28
CNOT3O75175 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CNOT3O75175 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CNOT3O75175 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT3O75175 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT3O75175 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT3O75175 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT3O75175 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.78■□□□□ 0.28
CNOT3O75175 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.78■□□□□ 0.28
CNOT3O75175 REXO1L9P-201ENST00000604264 2108 ntBASIC16.78■□□□□ 0.28
CNOT3O75175 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT3O75175 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.78■□□□□ 0.28
CNOT3O75175 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.78■□□□□ 0.28
CNOT3O75175 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT3O75175 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT3O75175 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.77■□□□□ 0.28
CNOT3O75175 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT3O75175 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.77■□□□□ 0.28
CNOT3O75175 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms