Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GFRA3O60609 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.57■□□□□ 0.24
GFRA3O60609 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GFRA3O60609 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GFRA3O60609 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GFRA3O60609 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
GFRA3O60609 BX276092.7-203ENST00000637198 1536 ntBASIC16.57■□□□□ 0.24
GFRA3O60609 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GFRA3O60609 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GFRA3O60609 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
GFRA3O60609 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.57■□□□□ 0.24
GFRA3O60609 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.57■□□□□ 0.24
GFRA3O60609 CTBP2P5-201ENST00000454986 1264 ntBASIC16.57■□□□□ 0.24
GFRA3O60609 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.57■□□□□ 0.24
GFRA3O60609 AC005412.3-201ENST00000580309 715 ntBASIC16.57■□□□□ 0.24
GFRA3O60609 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.57■□□□□ 0.24
GFRA3O60609 U62317.3-201ENST00000608319 855 ntBASIC16.57■□□□□ 0.24
GFRA3O60609 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GFRA3O60609 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.57■□□□□ 0.24
GFRA3O60609 AC112907.3-201ENST00000577781 2400 ntBASIC16.57■□□□□ 0.24
GFRA3O60609 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GFRA3O60609 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.57■□□□□ 0.24
GFRA3O60609 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.56■□□□□ 0.24
GFRA3O60609 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.56■□□□□ 0.24
GFRA3O60609 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
GFRA3O60609 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
GFRA3O60609 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
GFRA3O60609 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.56■□□□□ 0.24
GFRA3O60609 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.56■□□□□ 0.24
GFRA3O60609 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.56■□□□□ 0.24
GFRA3O60609 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GFRA3O60609 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GFRA3O60609 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GFRA3O60609 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GFRA3O60609 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.56■□□□□ 0.24
GFRA3O60609 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GFRA3O60609 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GFRA3O60609 AL353705.2-201ENST00000428243 662 ntBASIC16.56■□□□□ 0.24
GFRA3O60609 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.56■□□□□ 0.24
GFRA3O60609 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.56■□□□□ 0.24
GFRA3O60609 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC16.56■□□□□ 0.24
GFRA3O60609 ELK1P1-201ENST00000485699 580 ntBASIC16.56■□□□□ 0.24
GFRA3O60609 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.56■□□□□ 0.24
GFRA3O60609 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.56■□□□□ 0.24
GFRA3O60609 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
GFRA3O60609 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.56■□□□□ 0.24
GFRA3O60609 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
GFRA3O60609 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.56■□□□□ 0.24
GFRA3O60609 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.56■□□□□ 0.24
GFRA3O60609 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.56■□□□□ 0.24
GFRA3O60609 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GFRA3O60609 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.56■□□□□ 0.24
GFRA3O60609 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GFRA3O60609 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
GFRA3O60609 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GFRA3O60609 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GFRA3O60609 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GFRA3O60609 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.56■□□□□ 0.24
GFRA3O60609 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GFRA3O60609 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
GFRA3O60609 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GFRA3O60609 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.55■□□□□ 0.24
GFRA3O60609 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
GFRA3O60609 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GFRA3O60609 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.55■□□□□ 0.24
GFRA3O60609 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GFRA3O60609 AC093525.8-201ENST00000624099 1342 ntBASIC16.55■□□□□ 0.24
GFRA3O60609 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GFRA3O60609 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GFRA3O60609 AC005229.1-201ENST00000392885 409 ntBASIC16.55■□□□□ 0.24
GFRA3O60609 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GFRA3O60609 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GFRA3O60609 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GFRA3O60609 AC142381.1-201ENST00000426099 345 ntBASIC16.55■□□□□ 0.24
GFRA3O60609 FAM21FP-201ENST00000426241 1131 ntBASIC16.55■□□□□ 0.24
GFRA3O60609 KLF2P4-201ENST00000451959 1225 ntBASIC16.55■□□□□ 0.24
GFRA3O60609 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.55■□□□□ 0.24
GFRA3O60609 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.55■□□□□ 0.24
GFRA3O60609 RNA5SP412-201ENST00000516234 123 ntBASIC16.55■□□□□ 0.24
GFRA3O60609 DUTP2-201ENST00000519164 463 ntBASIC16.55■□□□□ 0.24
GFRA3O60609 ZNF890P-202ENST00000530367 1156 ntBASIC16.55■□□□□ 0.24
GFRA3O60609 AL138918.1-201ENST00000568306 659 ntBASIC16.55■□□□□ 0.24
GFRA3O60609 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.55■□□□□ 0.24
GFRA3O60609 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GFRA3O60609 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
GFRA3O60609 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GFRA3O60609 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GFRA3O60609 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
GFRA3O60609 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.55■□□□□ 0.24
GFRA3O60609 AL158211.5-201ENST00000623583 2518 ntBASIC16.55■□□□□ 0.24
GFRA3O60609 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
GFRA3O60609 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
GFRA3O60609 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GFRA3O60609 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
GFRA3O60609 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.54■□□□□ 0.24
GFRA3O60609 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GFRA3O60609 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
GFRA3O60609 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.54■□□□□ 0.24
GFRA3O60609 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GFRA3O60609 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms