Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
ARHGEF9O43307 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARHGEF9O43307 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ARHGEF9O43307 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.07■□□□□ 0.16
ARHGEF9O43307 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARHGEF9O43307 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARHGEF9O43307 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.07■□□□□ 0.16
ARHGEF9O43307 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ARHGEF9O43307 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARHGEF9O43307 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ARHGEF9O43307 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARHGEF9O43307 TSSC2-201ENST00000450217 709 ntBASIC16.07■□□□□ 0.16
ARHGEF9O43307 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.07■□□□□ 0.16
ARHGEF9O43307 RASA4DP-201ENST00000460726 1199 ntBASIC16.07■□□□□ 0.16
ARHGEF9O43307 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.07■□□□□ 0.16
ARHGEF9O43307 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ARHGEF9O43307 AC024563.2-201ENST00000603282 481 ntBASIC16.07■□□□□ 0.16
ARHGEF9O43307 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.07■□□□□ 0.16
ARHGEF9O43307 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ARHGEF9O43307 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ARHGEF9O43307 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ARHGEF9O43307 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ARHGEF9O43307 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARHGEF9O43307 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARHGEF9O43307 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.07■□□□□ 0.16
ARHGEF9O43307 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.07■□□□□ 0.16
ARHGEF9O43307 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ARHGEF9O43307 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.07■□□□□ 0.16
ARHGEF9O43307 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
ARHGEF9O43307 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARHGEF9O43307 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
ARHGEF9O43307 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARHGEF9O43307 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ARHGEF9O43307 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.06■□□□□ 0.16
ARHGEF9O43307 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
ARHGEF9O43307 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ARHGEF9O43307 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 HBZP1-201ENST00000354915 429 ntBASIC16.06■□□□□ 0.16
ARHGEF9O43307 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.06■□□□□ 0.16
ARHGEF9O43307 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.06■□□□□ 0.16
ARHGEF9O43307 AL845331.1-201ENST00000424978 1190 ntBASIC16.06■□□□□ 0.16
ARHGEF9O43307 FDX1P1-201ENST00000449115 551 ntBASIC16.06■□□□□ 0.16
ARHGEF9O43307 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.06■□□□□ 0.16
ARHGEF9O43307 KRT17P6-201ENST00000453795 1220 ntBASIC16.06■□□□□ 0.16
ARHGEF9O43307 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.06■□□□□ 0.16
ARHGEF9O43307 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.06■□□□□ 0.16
ARHGEF9O43307 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.06■□□□□ 0.16
ARHGEF9O43307 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ARHGEF9O43307 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ARHGEF9O43307 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
ARHGEF9O43307 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ARHGEF9O43307 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 AC108860.2-201ENST00000562760 2183 ntBASIC16.06■□□□□ 0.16
ARHGEF9O43307 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
ARHGEF9O43307 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF9O43307 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.06■□□□□ 0.16
ARHGEF9O43307 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.06■□□□□ 0.16
ARHGEF9O43307 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF9O43307 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.05■□□□□ 0.16
ARHGEF9O43307 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF9O43307 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ARHGEF9O43307 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
ARHGEF9O43307 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF9O43307 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF9O43307 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF9O43307 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.05■□□□□ 0.16
ARHGEF9O43307 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF9O43307 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF9O43307 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ARHGEF9O43307 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF9O43307 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF9O43307 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.05■□□□□ 0.16
ARHGEF9O43307 KRT8P10-201ENST00000450021 1447 ntBASIC16.05■□□□□ 0.16
ARHGEF9O43307 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms