Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.31■□□□□ 0.36
PFDN6O15212 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.31■□□□□ 0.36
PFDN6O15212 AC099336.1-202ENST00000602961 463 ntBASIC17.31■□□□□ 0.36
PFDN6O15212 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN6O15212 AC092119.3-201ENST00000612618 583 ntBASIC17.31■□□□□ 0.36
PFDN6O15212 AC093458.2-201ENST00000623150 629 ntBASIC17.31■□□□□ 0.36
PFDN6O15212 AC073592.5-201ENST00000624854 528 ntBASIC17.31■□□□□ 0.36
PFDN6O15212 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN6O15212 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN6O15212 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN6O15212 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN6O15212 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN6O15212 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN6O15212 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN6O15212 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PFDN6O15212 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PFDN6O15212 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN6O15212 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.3■□□□□ 0.36
PFDN6O15212 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN6O15212 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN6O15212 AC093525.9-201ENST00000624961 1746 ntBASIC17.3■□□□□ 0.36
PFDN6O15212 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PFDN6O15212 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.3■□□□□ 0.36
PFDN6O15212 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN6O15212 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.3■□□□□ 0.36
PFDN6O15212 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.3■□□□□ 0.36
PFDN6O15212 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.3■□□□□ 0.36
PFDN6O15212 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.3■□□□□ 0.36
PFDN6O15212 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN6O15212 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN6O15212 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN6O15212 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN6O15212 RCN1P2-201ENST00000398357 915 ntBASIC17.3■□□□□ 0.36
PFDN6O15212 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.3■□□□□ 0.36
PFDN6O15212 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.3■□□□□ 0.36
PFDN6O15212 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.3■□□□□ 0.36
PFDN6O15212 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.3■□□□□ 0.36
PFDN6O15212 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.3■□□□□ 0.36
PFDN6O15212 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.3■□□□□ 0.36
PFDN6O15212 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PFDN6O15212 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN6O15212 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN6O15212 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN6O15212 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
PFDN6O15212 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
PFDN6O15212 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN6O15212 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN6O15212 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.3■□□□□ 0.36
PFDN6O15212 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PFDN6O15212 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN6O15212 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN6O15212 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PFDN6O15212 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN6O15212 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN6O15212 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PFDN6O15212 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.3■□□□□ 0.36
PFDN6O15212 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN6O15212 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PFDN6O15212 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN6O15212 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN6O15212 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PFDN6O15212 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN6O15212 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN6O15212 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN6O15212 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN6O15212 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.29■□□□□ 0.36
PFDN6O15212 AL356309.3-201ENST00000624132 1934 ntBASIC17.29■□□□□ 0.36
PFDN6O15212 FLJ16779-201ENST00000612722 7638 ntBASIC17.29■□□□□ 0.36
PFDN6O15212 AP001094.4-201ENST00000579008 2176 ntBASIC17.29■□□□□ 0.36
PFDN6O15212 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN6O15212 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PFDN6O15212 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN6O15212 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.29■□□□□ 0.36
PFDN6O15212 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN6O15212 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PFDN6O15212 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN6O15212 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.29■□□□□ 0.36
PFDN6O15212 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN6O15212 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN6O15212 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN6O15212 KRT16P4-201ENST00000453883 522 ntBASIC17.29■□□□□ 0.36
PFDN6O15212 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.29■□□□□ 0.36
PFDN6O15212 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.29■□□□□ 0.36
PFDN6O15212 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PFDN6O15212 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PFDN6O15212 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.29■□□□□ 0.36
PFDN6O15212 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.29■□□□□ 0.36
PFDN6O15212 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PFDN6O15212 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN6O15212 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.29■□□□□ 0.36
PFDN6O15212 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.29■□□□□ 0.36
PFDN6O15212 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN6O15212 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN6O15212 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN6O15212 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PFDN6O15212 AL121761.2-201ENST00000598007 1648 ntBASIC17.29■□□□□ 0.36
PFDN6O15212 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.28■□□□□ 0.36
PFDN6O15212 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.28■□□□□ 0.36
PFDN6O15212 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PFDN6O15212 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms