Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NTN3O00634 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NTN3O00634 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NTN3O00634 SPDYE7P-202ENST00000420373 878 ntBASIC16.19■□□□□ 0.18
NTN3O00634 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NTN3O00634 AC125807.1-201ENST00000483097 614 ntBASIC16.19■□□□□ 0.18
NTN3O00634 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NTN3O00634 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.19■□□□□ 0.18
NTN3O00634 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NTN3O00634 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.19■□□□□ 0.18
NTN3O00634 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NTN3O00634 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NTN3O00634 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.19■□□□□ 0.18
NTN3O00634 AL031055.1-201ENST00000606362 631 ntBASIC16.19■□□□□ 0.18
NTN3O00634 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NTN3O00634 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.19■□□□□ 0.18
NTN3O00634 AC008267.7-201ENST00000624570 1194 ntBASIC16.19■□□□□ 0.18
NTN3O00634 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NTN3O00634 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
NTN3O00634 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NTN3O00634 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NTN3O00634 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NTN3O00634 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NTN3O00634 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.19■□□□□ 0.18
NTN3O00634 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NTN3O00634 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.19■□□□□ 0.18
NTN3O00634 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NTN3O00634 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NTN3O00634 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NTN3O00634 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.18■□□□□ 0.18
NTN3O00634 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NTN3O00634 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NTN3O00634 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NTN3O00634 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NTN3O00634 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NTN3O00634 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.18■□□□□ 0.18
NTN3O00634 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NTN3O00634 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NTN3O00634 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NTN3O00634 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NTN3O00634 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NTN3O00634 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.18■□□□□ 0.18
NTN3O00634 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.18■□□□□ 0.18
NTN3O00634 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.18■□□□□ 0.18
NTN3O00634 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.18■□□□□ 0.18
NTN3O00634 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.18■□□□□ 0.18
NTN3O00634 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.18■□□□□ 0.18
NTN3O00634 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.18■□□□□ 0.18
NTN3O00634 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.18■□□□□ 0.18
NTN3O00634 AC239800.4-201ENST00000603712 296 ntBASIC16.18■□□□□ 0.18
NTN3O00634 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NTN3O00634 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NTN3O00634 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NTN3O00634 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NTN3O00634 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NTN3O00634 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.18■□□□□ 0.18
NTN3O00634 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NTN3O00634 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NTN3O00634 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NTN3O00634 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NTN3O00634 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NTN3O00634 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
NTN3O00634 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NTN3O00634 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NTN3O00634 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NTN3O00634 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NTN3O00634 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NTN3O00634 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.18■□□□□ 0.18
NTN3O00634 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NTN3O00634 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NTN3O00634 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NTN3O00634 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
NTN3O00634 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NTN3O00634 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.17■□□□□ 0.18
NTN3O00634 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.17■□□□□ 0.18
NTN3O00634 MIR346-201ENST00000362234 95 ntBASIC16.17■□□□□ 0.18
NTN3O00634 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NTN3O00634 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.17■□□□□ 0.18
NTN3O00634 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NTN3O00634 SLC25A39P2-201ENST00000537614 270 ntBASIC16.17■□□□□ 0.18
NTN3O00634 AC087641.1-201ENST00000557561 1021 ntBASIC16.17■□□□□ 0.18
NTN3O00634 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
NTN3O00634 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.17■□□□□ 0.18
NTN3O00634 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
NTN3O00634 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.17■□□□□ 0.18
NTN3O00634 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.17■□□□□ 0.18
NTN3O00634 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NTN3O00634 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NTN3O00634 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.17■□□□□ 0.18
NTN3O00634 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NTN3O00634 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NTN3O00634 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NTN3O00634 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.17■□□□□ 0.18
NTN3O00634 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NTN3O00634 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.16■□□□□ 0.18
NTN3O00634 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.16■□□□□ 0.18
NTN3O00634 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NTN3O00634 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NTN3O00634 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
NTN3O00634 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms