Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 TOP3BP1-201ENST00000420768 1380 ntBASIC22.02■■□□□ 1.12
CHL1O00533 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CHL1O00533 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CHL1O00533 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHL1O00533 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC22.02■■□□□ 1.12
CHL1O00533 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC22.02■■□□□ 1.12
CHL1O00533 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHL1O00533 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHL1O00533 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC22.02■■□□□ 1.12
CHL1O00533 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC22.02■■□□□ 1.12
CHL1O00533 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC22.02■■□□□ 1.12
CHL1O00533 AL513480.1-201ENST00000451731 511 ntBASIC22.02■■□□□ 1.12
CHL1O00533 AC074386.1-202ENST00000463561 864 ntBASIC22.02■■□□□ 1.12
CHL1O00533 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC22.02■■□□□ 1.12
CHL1O00533 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC22.02■■□□□ 1.12
CHL1O00533 AC010327.4-202ENST00000591484 748 ntBASIC22.02■■□□□ 1.12
CHL1O00533 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC22.02■■□□□ 1.12
CHL1O00533 BSG-214ENST00000614867 960 ntTSL 3 BASIC22.02■■□□□ 1.12
CHL1O00533 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHL1O00533 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CHL1O00533 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
CHL1O00533 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC22.02■■□□□ 1.12
CHL1O00533 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CHL1O00533 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC22.02■■□□□ 1.12
CHL1O00533 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHL1O00533 FOS-208ENST00000555686 1496 ntTSL 2 BASIC22.02■■□□□ 1.12
CHL1O00533 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
CHL1O00533 HARS-203ENST00000431330 1774 ntTSL 2 BASIC22.02■■□□□ 1.11
CHL1O00533 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
CHL1O00533 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
CHL1O00533 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
CHL1O00533 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
CHL1O00533 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHL1O00533 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CHL1O00533 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHL1O00533 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC22.01■■□□□ 1.11
CHL1O00533 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHL1O00533 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHL1O00533 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CHL1O00533 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHL1O00533 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CHL1O00533 DNAJB3-201ENST00000446806 729 ntBASIC22.01■■□□□ 1.11
CHL1O00533 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHL1O00533 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC22.01■■□□□ 1.11
CHL1O00533 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC22.01■■□□□ 1.11
CHL1O00533 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHL1O00533 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CHL1O00533 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHL1O00533 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CHL1O00533 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHL1O00533 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC22.01■■□□□ 1.11
CHL1O00533 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC22.01■■□□□ 1.11
CHL1O00533 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHL1O00533 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC22.01■■□□□ 1.11
CHL1O00533 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CHL1O00533 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CHL1O00533 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CHL1O00533 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC22■■□□□ 1.11
CHL1O00533 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
CHL1O00533 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC22■■□□□ 1.11
CHL1O00533 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC22■■□□□ 1.11
CHL1O00533 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22■■□□□ 1.11
CHL1O00533 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC22■■□□□ 1.11
CHL1O00533 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CHL1O00533 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CHL1O00533 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
CHL1O00533 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC22■■□□□ 1.11
CHL1O00533 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC22■■□□□ 1.11
CHL1O00533 SMN2-210ENST00000511812 867 ntTSL 2 BASIC22■■□□□ 1.11
CHL1O00533 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC22■■□□□ 1.11
CHL1O00533 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC22■■□□□ 1.11
CHL1O00533 MED16-214ENST00000617672 554 ntTSL 5 BASIC22■■□□□ 1.11
CHL1O00533 SLC22A20-204ENST00000530038 1673 ntBASIC22■■□□□ 1.11
CHL1O00533 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CHL1O00533 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
CHL1O00533 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
CHL1O00533 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC22■■□□□ 1.11
CHL1O00533 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CHL1O00533 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CHL1O00533 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CHL1O00533 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHL1O00533 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHL1O00533 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHL1O00533 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHL1O00533 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.99■■□□□ 1.11
CHL1O00533 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHL1O00533 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHL1O00533 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC21.99■■□□□ 1.11
CHL1O00533 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHL1O00533 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC21.99■■□□□ 1.11
CHL1O00533 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
CHL1O00533 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CHL1O00533 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21.99■■□□□ 1.11
CHL1O00533 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHL1O00533 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHL1O00533 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHL1O00533 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHL1O00533 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC21.99■■□□□ 1.11
CHL1O00533 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC21.99■■□□□ 1.11
CHL1O00533 FALEC-201ENST00000416894 566 ntTSL 3 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms