Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC78A2IDD5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CCDC78A2IDD5 NKILA-202ENST00000614771 2598 ntBASIC17.51■□□□□ 0.39
CCDC78A2IDD5 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC78A2IDD5 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC78A2IDD5 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC78A2IDD5 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC78A2IDD5 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC78A2IDD5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 NFIC-211ENST00000641145 8399 ntBASIC17.5■□□□□ 0.39
CCDC78A2IDD5 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 AC016396.2-201ENST00000562575 1417 ntBASIC17.5■□□□□ 0.39
CCDC78A2IDD5 MYCLP1-201ENST00000372451 1075 ntBASIC17.5■□□□□ 0.39
CCDC78A2IDD5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 AC012615.1-201ENST00000565797 1299 ntBASIC17.5■□□□□ 0.39
CCDC78A2IDD5 STK25P1-201ENST00000585406 838 ntBASIC17.5■□□□□ 0.39
CCDC78A2IDD5 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 AC116353.5-201ENST00000638148 1699 ntBASIC17.5■□□□□ 0.39
CCDC78A2IDD5 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 INTS4P1-201ENST00000438455 1935 ntBASIC17.5■□□□□ 0.39
CCDC78A2IDD5 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 AC084018.2-201ENST00000613093 2607 ntBASIC17.5■□□□□ 0.39
CCDC78A2IDD5 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 AC093525.9-201ENST00000624961 1746 ntBASIC17.5■□□□□ 0.39
CCDC78A2IDD5 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC78A2IDD5 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 SLC25A1P3-201ENST00000395415 828 ntBASIC17.49■□□□□ 0.39
CCDC78A2IDD5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 STK19B-204ENST00000512515 211 ntBASIC17.49■□□□□ 0.39
CCDC78A2IDD5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 AC073592.5-201ENST00000624854 528 ntBASIC17.49■□□□□ 0.39
CCDC78A2IDD5 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCDC78A2IDD5 AL353593.2-201ENST00000602529 1483 ntBASIC17.49■□□□□ 0.39
CCDC78A2IDD5 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms