Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 HTR5BP-201ENST00000430851 1154 ntBASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 AC092865.6-201ENST00000642101 219 ntBASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 PCDHA12-202ENST00000613593 2588 ntBASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGA9Q9Y5G4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PCDHGA9Q9Y5G4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
PCDHGA9Q9Y5G4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.18
PCDHGA9Q9Y5G4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 PHGDH-209ENST00000641074 1780 ntBASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 RFPL4AP1-201ENST00000530883 850 ntBASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 AC010654.1-201ENST00000615722 808 ntBASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 AL805961.1-202ENST00000641562 540 ntBASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGA9Q9Y5G4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 CNN2P11-201ENST00000429351 262 ntBASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 CYMP-203ENST00000474680 1263 ntBASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms