Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 AC093010.1-201ENST00000473625 1624 ntBASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALCOCO1Q9P1Z2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 AC011498.5-201ENST00000592027 486 ntBASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALCOCO1Q9P1Z2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 KRT89P-201ENST00000620027 1478 ntBASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 IGHGP-201ENST00000390555 1178 ntBASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 TSSC2-201ENST00000450217 709 ntBASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 AC005332.3-201ENST00000589904 676 ntBASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 AC092329.2-201ENST00000598402 547 ntBASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 AC004263.2-201ENST00000617183 678 ntBASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 PCDHA14-201ENST00000506751 2298 ntBASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.91■□□□□ 0.62
CALCOCO1Q9P1Z2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms