Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 AC126177.1-201ENST00000547829 2218 ntBASIC20.47■□□□□ 0.87
RTN4Q9NQC3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC20.47■□□□□ 0.87
RTN4Q9NQC3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 AL513523.2-202ENST00000427283 2040 ntBASIC20.46■□□□□ 0.87
RTN4Q9NQC3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 RNA5SP413-201ENST00000516373 109 ntBASIC20.46■□□□□ 0.87
RTN4Q9NQC3 AC090192.1-201ENST00000517740 490 ntBASIC20.46■□□□□ 0.87
RTN4Q9NQC3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4Q9NQC3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
RTN4Q9NQC3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.45■□□□□ 0.87
RTN4Q9NQC3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 AC133681.1-201ENST00000465482 601 ntBASIC20.45■□□□□ 0.86
RTN4Q9NQC3 AC091390.4-202ENST00000476426 537 ntBASIC20.45■□□□□ 0.86
RTN4Q9NQC3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 AC124016.1-201ENST00000609552 612 ntBASIC20.45■□□□□ 0.86
RTN4Q9NQC3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4Q9NQC3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 NIFKP9-201ENST00000419265 221 ntBASIC20.44■□□□□ 0.86
RTN4Q9NQC3 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 ZFAND6-220ENST00000561060 891 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms