Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps33aQ9D2N9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps33aQ9D2N9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Gm7977-201ENSMUST00000193787 748 ntBASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps33aQ9D2N9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 AC164702.1-201ENSMUST00000220135 2212 ntBASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps33aQ9D2N9 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Gm10728-201ENSMUST00000194292 1829 ntBASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.14■□□□□ 0.01
Vps33aQ9D2N9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps33aQ9D2N9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps33aQ9D2N9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps33aQ9D2N9 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps33aQ9D2N9 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps33aQ9D2N9 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps33aQ9D2N9 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps33aQ9D2N9 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps33aQ9D2N9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps33aQ9D2N9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps33aQ9D2N9 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps33aQ9D2N9 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps33aQ9D2N9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps33aQ9D2N9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps33aQ9D2N9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps33aQ9D2N9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms