Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 AP001094.4-201ENST00000579008 2176 ntBASIC17.74■□□□□ 0.43
SCG3Q8WXD2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 AC097374.2-201ENST00000618617 1306 ntBASIC17.74■□□□□ 0.43
SCG3Q8WXD2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 BX276092.7-203ENST00000637198 1536 ntBASIC17.74■□□□□ 0.43
SCG3Q8WXD2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 LINC00304-203ENST00000565008 1864 ntBASIC17.74■□□□□ 0.43
SCG3Q8WXD2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 AC096633.1-201ENST00000422446 749 ntBASIC17.74■□□□□ 0.43
SCG3Q8WXD2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 AC068472.1-201ENST00000474589 881 ntBASIC17.74■□□□□ 0.43
SCG3Q8WXD2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 AL662844.1-201ENST00000546340 181 ntBASIC17.74■□□□□ 0.43
SCG3Q8WXD2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 AL121912.1-201ENST00000603683 238 ntBASIC17.74■□□□□ 0.43
SCG3Q8WXD2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 PCDH8P1-201ENST00000428983 2773 ntBASIC17.74■□□□□ 0.43
SCG3Q8WXD2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCG3Q8WXD2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 AC005104.2-201ENST00000427818 678 ntBASIC17.73■□□□□ 0.43
SCG3Q8WXD2 MTCL1P1-201ENST00000446207 792 ntBASIC17.73■□□□□ 0.43
SCG3Q8WXD2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 AC064862.7-201ENST00000604520 867 ntBASIC17.73■□□□□ 0.43
SCG3Q8WXD2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCG3Q8WXD2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms