Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.44■■□□□ 1.02
UBE3BQ7Z3V4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBE3BQ7Z3V4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBE3BQ7Z3V4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
UBE3BQ7Z3V4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.44■■□□□ 1.02
UBE3BQ7Z3V4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UBE3BQ7Z3V4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
UBE3BQ7Z3V4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
UBE3BQ7Z3V4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBE3BQ7Z3V4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
UBE3BQ7Z3V4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC21.43■■□□□ 1.02
UBE3BQ7Z3V4 AL513480.1-201ENST00000451731 511 ntBASIC21.43■■□□□ 1.02
UBE3BQ7Z3V4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
UBE3BQ7Z3V4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.43■■□□□ 1.02
UBE3BQ7Z3V4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC21.43■■□□□ 1.02
UBE3BQ7Z3V4 MIR4469-201ENST00000583919 79 ntBASIC21.43■■□□□ 1.02
UBE3BQ7Z3V4 AC007064.4-201ENST00000637740 555 ntBASIC21.43■■□□□ 1.02
UBE3BQ7Z3V4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.43■■□□□ 1.02
UBE3BQ7Z3V4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
UBE3BQ7Z3V4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBE3BQ7Z3V4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UBE3BQ7Z3V4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBE3BQ7Z3V4 HTR7P1-202ENST00000624664 4411 ntBASIC21.43■■□□□ 1.02
UBE3BQ7Z3V4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UBE3BQ7Z3V4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.43■■□□□ 1.02
UBE3BQ7Z3V4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
UBE3BQ7Z3V4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
UBE3BQ7Z3V4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 AC211486.1-202ENST00000416371 468 ntBASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 HTR5BP-201ENST00000430851 1154 ntBASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 EGFEM1P-202ENST00000431685 1563 ntBASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 AC074386.1-202ENST00000463561 864 ntBASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 AC211476.1-201ENST00000503899 468 ntBASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 YBX1P5-201ENST00000509441 847 ntBASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 AP001160.2-201ENST00000596071 487 ntBASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBE3BQ7Z3V4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
UBE3BQ7Z3V4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
UBE3BQ7Z3V4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.41■■□□□ 1.02
UBE3BQ7Z3V4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBE3BQ7Z3V4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.41■■□□□ 1.02
UBE3BQ7Z3V4 AC093525.9-201ENST00000624961 1746 ntBASIC21.41■■□□□ 1.02
UBE3BQ7Z3V4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
UBE3BQ7Z3V4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBE3BQ7Z3V4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBE3BQ7Z3V4 AC129492.6-201ENST00000611383 1305 ntBASIC21.41■■□□□ 1.02
UBE3BQ7Z3V4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC21.41■■□□□ 1.02
UBE3BQ7Z3V4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBE3BQ7Z3V4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBE3BQ7Z3V4 CD82-202ENST00000342935 967 ntTSL 5 BASIC21.41■■□□□ 1.02
UBE3BQ7Z3V4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBE3BQ7Z3V4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBE3BQ7Z3V4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UBE3BQ7Z3V4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC21.41■■□□□ 1.02
UBE3BQ7Z3V4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
UBE3BQ7Z3V4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBE3BQ7Z3V4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBE3BQ7Z3V4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
UBE3BQ7Z3V4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBE3BQ7Z3V4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UBE3BQ7Z3V4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UBE3BQ7Z3V4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
UBE3BQ7Z3V4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBE3BQ7Z3V4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UBE3BQ7Z3V4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBE3BQ7Z3V4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UBE3BQ7Z3V4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBE3BQ7Z3V4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC21.4■■□□□ 1.02
UBE3BQ7Z3V4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC21.4■■□□□ 1.02
UBE3BQ7Z3V4 DNAJB3-202ENST00000449667 1266 ntBASIC21.4■■□□□ 1.02
UBE3BQ7Z3V4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UBE3BQ7Z3V4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC21.4■■□□□ 1.02
UBE3BQ7Z3V4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC21.4■■□□□ 1.02
UBE3BQ7Z3V4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC21.4■■□□□ 1.02
UBE3BQ7Z3V4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC21.4■■□□□ 1.02
UBE3BQ7Z3V4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UBE3BQ7Z3V4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21.4■■□□□ 1.02
UBE3BQ7Z3V4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBE3BQ7Z3V4 AC092919.2-201ENST00000623631 1645 ntBASIC21.4■■□□□ 1.02
UBE3BQ7Z3V4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms