Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 HOXB1-202ENST00000577092 1414 ntBASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 LINC01126-201ENST00000623515 1646 ntBASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 KRT8P7-201ENST00000533003 1432 ntBASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CHRFAM7AQ494W8 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 AC022211.2-201ENST00000585075 2527 ntBASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 AC133963.1-201ENST00000504166 1679 ntBASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 AKR1C7P-201ENST00000305623 895 ntBASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 NUS1P2-201ENST00000417358 873 ntBASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 AF186996.4-201ENST00000467186 377 ntBASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 PMS2P7-201ENST00000506558 1336 ntBASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRFAM7AQ494W8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHRFAM7AQ494W8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms