Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUBP1P53384 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NUBP1P53384 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUBP1P53384 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.15■□□□□ 0.34
NUBP1P53384 OR2X1P-201ENST00000421144 687 ntBASIC17.15■□□□□ 0.34
NUBP1P53384 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.15■□□□□ 0.34
NUBP1P53384 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
NUBP1P53384 BOLL-205ENST00000433157 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUBP1P53384 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NUBP1P53384 INE1-201ENST00000456273 945 ntBASIC17.15■□□□□ 0.34
NUBP1P53384 RN7SL752P-201ENST00000463779 287 ntBASIC17.15■□□□□ 0.34
NUBP1P53384 ZNF506-204ENST00000545006 1007 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NUBP1P53384 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.15■□□□□ 0.34
NUBP1P53384 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.15■□□□□ 0.34
NUBP1P53384 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NUBP1P53384 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NUBP1P53384 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.15■□□□□ 0.34
NUBP1P53384 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.15■□□□□ 0.34
NUBP1P53384 AP001099.1-201ENST00000579385 855 ntTSL 5 BASIC17.15■□□□□ 0.34
NUBP1P53384 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.15■□□□□ 0.34
NUBP1P53384 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
NUBP1P53384 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NUBP1P53384 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.15■□□□□ 0.34
NUBP1P53384 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NUBP1P53384 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NUBP1P53384 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NUBP1P53384 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.15■□□□□ 0.34
NUBP1P53384 AIRN-201ENST00000601203 4374 ntBASIC17.15■□□□□ 0.34
NUBP1P53384 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUBP1P53384 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.15■□□□□ 0.34
NUBP1P53384 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.14■□□□□ 0.34
NUBP1P53384 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NUBP1P53384 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NUBP1P53384 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.14■□□□□ 0.33
NUBP1P53384 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NUBP1P53384 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NUBP1P53384 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
NUBP1P53384 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.14■□□□□ 0.33
NUBP1P53384 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NUBP1P53384 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NUBP1P53384 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
NUBP1P53384 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NUBP1P53384 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NUBP1P53384 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.14■□□□□ 0.33
NUBP1P53384 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.14■□□□□ 0.33
NUBP1P53384 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC17.14■□□□□ 0.33
NUBP1P53384 AC009477.1-201ENST00000452936 217 ntBASIC17.14■□□□□ 0.33
NUBP1P53384 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.14■□□□□ 0.33
NUBP1P53384 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NUBP1P53384 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NUBP1P53384 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.14■□□□□ 0.33
NUBP1P53384 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.14■□□□□ 0.33
NUBP1P53384 AC021269.1-201ENST00000526860 705 ntBASIC17.14■□□□□ 0.33
NUBP1P53384 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.14■□□□□ 0.33
NUBP1P53384 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC17.14■□□□□ 0.33
NUBP1P53384 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.14■□□□□ 0.33
NUBP1P53384 ZNF826P-202ENST00000542380 1067 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NUBP1P53384 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NUBP1P53384 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
NUBP1P53384 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
NUBP1P53384 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.14■□□□□ 0.33
NUBP1P53384 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.14■□□□□ 0.33
NUBP1P53384 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NUBP1P53384 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NUBP1P53384 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NUBP1P53384 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NUBP1P53384 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.14■□□□□ 0.33
NUBP1P53384 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NUBP1P53384 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.14■□□□□ 0.33
NUBP1P53384 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NUBP1P53384 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NUBP1P53384 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NUBP1P53384 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.13■□□□□ 0.33
NUBP1P53384 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NUBP1P53384 AC243964.3-201ENST00000623022 2028 ntBASIC17.13■□□□□ 0.33
NUBP1P53384 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.13■□□□□ 0.33
NUBP1P53384 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUBP1P53384 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.13■□□□□ 0.33
NUBP1P53384 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NUBP1P53384 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUBP1P53384 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUBP1P53384 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NUBP1P53384 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NUBP1P53384 PPP2R2DP1-201ENST00000420526 637 ntBASIC17.13■□□□□ 0.33
NUBP1P53384 DFFBP1-201ENST00000433250 979 ntBASIC17.13■□□□□ 0.33
NUBP1P53384 AC022210.1-201ENST00000449856 793 ntBASIC17.13■□□□□ 0.33
NUBP1P53384 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUBP1P53384 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.13■□□□□ 0.33
NUBP1P53384 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.13■□□□□ 0.33
NUBP1P53384 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NUBP1P53384 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.13■□□□□ 0.33
NUBP1P53384 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
NUBP1P53384 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.13■□□□□ 0.33
NUBP1P53384 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
NUBP1P53384 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NUBP1P53384 GNAS-203ENST00000306120 1878 ntBASIC17.13■□□□□ 0.33
NUBP1P53384 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.13■□□□□ 0.33
NUBP1P53384 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NUBP1P53384 AL354892.3-201ENST00000586101 1630 ntBASIC17.13■□□□□ 0.33
NUBP1P53384 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms