Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 AC133963.1-201ENST00000504166 1679 ntBASIC17.42■□□□□ 0.38
VCLP18206 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 BX276092.7-203ENST00000637198 1536 ntBASIC17.42■□□□□ 0.38
VCLP18206 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.42■□□□□ 0.38
VCLP18206 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.42■□□□□ 0.38
VCLP18206 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.42■□□□□ 0.38
VCLP18206 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.42■□□□□ 0.38
VCLP18206 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.42■□□□□ 0.38
VCLP18206 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.42■□□□□ 0.38
VCLP18206 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.42■□□□□ 0.38
VCLP18206 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.42■□□□□ 0.38
VCLP18206 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 INTS4P1-201ENST00000438455 1935 ntBASIC17.42■□□□□ 0.38
VCLP18206 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 AL121761.2-201ENST00000598007 1648 ntBASIC17.42■□□□□ 0.38
VCLP18206 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
VCLP18206 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VCLP18206 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.41■□□□□ 0.38
VCLP18206 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VCLP18206 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
VCLP18206 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VCLP18206 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.41■□□□□ 0.38
VCLP18206 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
VCLP18206 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VCLP18206 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VCLP18206 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VCLP18206 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VCLP18206 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VCLP18206 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.41■□□□□ 0.38
VCLP18206 AC103564.2-201ENST00000432853 1299 ntBASIC17.41■□□□□ 0.38
VCLP18206 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.41■□□□□ 0.38
VCLP18206 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.41■□□□□ 0.38
VCLP18206 AC122714.2-201ENST00000502787 707 ntBASIC17.41■□□□□ 0.38
VCLP18206 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.41■□□□□ 0.38
VCLP18206 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
VCLP18206 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.41■□□□□ 0.38
VCLP18206 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VCLP18206 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
VCLP18206 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
VCLP18206 RN7SL510P-201ENST00000581311 263 ntBASIC17.41■□□□□ 0.38
VCLP18206 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.41■□□□□ 0.38
VCLP18206 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.41■□□□□ 0.38
VCLP18206 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.41■□□□□ 0.38
VCLP18206 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.41■□□□□ 0.38
VCLP18206 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
VCLP18206 PCDH8P1-201ENST00000428983 2773 ntBASIC17.41■□□□□ 0.38
VCLP18206 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.41■□□□□ 0.38
VCLP18206 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
VCLP18206 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.41■□□□□ 0.38
VCLP18206 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VCLP18206 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VCLP18206 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.41■□□□□ 0.38
VCLP18206 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
VCLP18206 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.41■□□□□ 0.38
VCLP18206 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VCLP18206 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VCLP18206 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VCLP18206 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VCLP18206 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VCLP18206 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCLP18206 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.4■□□□□ 0.38
VCLP18206 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.4■□□□□ 0.38
VCLP18206 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCLP18206 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCLP18206 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.4■□□□□ 0.38
VCLP18206 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCLP18206 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCLP18206 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCLP18206 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCLP18206 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCLP18206 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCLP18206 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCLP18206 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.4■□□□□ 0.38
VCLP18206 COX5BP2-201ENST00000392354 334 ntBASIC17.4■□□□□ 0.38
VCLP18206 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
VCLP18206 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.4■□□□□ 0.38
VCLP18206 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.4■□□□□ 0.38
VCLP18206 SAPCD2P3-201ENST00000455031 850 ntBASIC17.4■□□□□ 0.38
VCLP18206 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms