Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC019129.2-201ENST00000609837 1235 ntBASIC15.19■□□□□ 0.02
UBCP0CG48 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
UBCP0CG48 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
UBCP0CG48 DOC2GP-204ENST00000639052 2548 ntBASIC15.19■□□□□ 0.02
UBCP0CG48 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
UBCP0CG48 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.19■□□□□ 0.02
UBCP0CG48 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.19■□□□□ 0.02
UBCP0CG48 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
UBCP0CG48 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UBCP0CG48 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UBCP0CG48 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
UBCP0CG48 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.19■□□□□ 0.02
UBCP0CG48 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
UBCP0CG48 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
UBCP0CG48 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
UBCP0CG48 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
UBCP0CG48 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UBCP0CG48 AC105020.1-201ENST00000435356 2205 ntBASIC15.19■□□□□ 0.02
UBCP0CG48 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.18■□□□□ 0.02
UBCP0CG48 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
UBCP0CG48 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
UBCP0CG48 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.18■□□□□ 0.02
UBCP0CG48 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.18■□□□□ 0.02
UBCP0CG48 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 AGGF1P2-201ENST00000426656 2106 ntBASIC15.18■□□□□ 0.02
UBCP0CG48 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
UBCP0CG48 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
UBCP0CG48 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.18■□□□□ 0.02
UBCP0CG48 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.18■□□□□ 0.02
UBCP0CG48 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.18■□□□□ 0.02
UBCP0CG48 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.18■□□□□ 0.02
UBCP0CG48 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.18■□□□□ 0.02
UBCP0CG48 AC111152.3-201ENST00000569699 673 ntBASIC15.18■□□□□ 0.02
UBCP0CG48 AC109462.3-201ENST00000573934 613 ntBASIC15.18■□□□□ 0.02
UBCP0CG48 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.18■□□□□ 0.02
UBCP0CG48 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.18■□□□□ 0.02
UBCP0CG48 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
UBCP0CG48 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
UBCP0CG48 AC073912.3-201ENST00000624414 853 ntBASIC15.18■□□□□ 0.02
UBCP0CG48 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.18■□□□□ 0.02
UBCP0CG48 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
UBCP0CG48 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
UBCP0CG48 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.18■□□□□ 0.02
UBCP0CG48 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.18■□□□□ 0.02
UBCP0CG48 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
UBCP0CG48 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.17■□□□□ 0.02
UBCP0CG48 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.17■□□□□ 0.02
UBCP0CG48 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
UBCP0CG48 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
UBCP0CG48 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
UBCP0CG48 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
UBCP0CG48 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
UBCP0CG48 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.17■□□□□ 0.02
UBCP0CG48 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.17■□□□□ 0.02
UBCP0CG48 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.17■□□□□ 0.02
UBCP0CG48 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
UBCP0CG48 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
UBCP0CG48 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.17■□□□□ 0.02
UBCP0CG48 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.17■□□□□ 0.02
UBCP0CG48 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.17■□□□□ 0.02
UBCP0CG48 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
UBCP0CG48 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.17■□□□□ 0.02
UBCP0CG48 AC122714.2-201ENST00000502787 707 ntBASIC15.17■□□□□ 0.02
UBCP0CG48 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms