Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.41■□□□□ 0.38
RETP07949 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.41■□□□□ 0.38
RETP07949 AL805961.1-202ENST00000641562 540 ntBASIC17.41■□□□□ 0.38
RETP07949 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RETP07949 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RETP07949 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RETP07949 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RETP07949 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RETP07949 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RETP07949 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.41■□□□□ 0.38
RETP07949 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RETP07949 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RETP07949 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RETP07949 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
RETP07949 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RETP07949 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.4■□□□□ 0.38
RETP07949 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
RETP07949 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RETP07949 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RETP07949 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
RETP07949 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RETP07949 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RETP07949 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RETP07949 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RETP07949 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RETP07949 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.4■□□□□ 0.38
RETP07949 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.4■□□□□ 0.38
RETP07949 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RETP07949 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RETP07949 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.4■□□□□ 0.38
RETP07949 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RETP07949 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RETP07949 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RETP07949 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RETP07949 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RETP07949 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.4■□□□□ 0.38
RETP07949 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RETP07949 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RETP07949 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RETP07949 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RETP07949 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RETP07949 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.4■□□□□ 0.38
RETP07949 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.4■□□□□ 0.38
RETP07949 AC067863.1-201ENST00000494933 530 ntBASIC17.4■□□□□ 0.38
RETP07949 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.4■□□□□ 0.38
RETP07949 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.4■□□□□ 0.38
RETP07949 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.4■□□□□ 0.38
RETP07949 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.4■□□□□ 0.38
RETP07949 AC023141.13-201ENST00000604991 943 ntBASIC17.4■□□□□ 0.38
RETP07949 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.4■□□□□ 0.38
RETP07949 REXO1L3P-201ENST00000622202 1288 ntBASIC17.4■□□□□ 0.38
RETP07949 AC092902.6-201ENST00000641783 218 ntBASIC17.4■□□□□ 0.38
RETP07949 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RETP07949 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RETP07949 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RETP07949 FLJ13224-201ENST00000313737 1514 ntBASIC17.4■□□□□ 0.38
RETP07949 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RETP07949 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RETP07949 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.4■□□□□ 0.38
RETP07949 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RETP07949 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RETP07949 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RETP07949 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.39■□□□□ 0.37
RETP07949 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RETP07949 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RETP07949 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.39■□□□□ 0.37
RETP07949 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
RETP07949 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RETP07949 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
RETP07949 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RETP07949 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RETP07949 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RETP07949 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RETP07949 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.39■□□□□ 0.37
RETP07949 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
RETP07949 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RETP07949 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.39■□□□□ 0.37
RETP07949 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.39■□□□□ 0.37
RETP07949 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.39■□□□□ 0.37
RETP07949 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.39■□□□□ 0.37
RETP07949 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.39■□□□□ 0.37
RETP07949 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.39■□□□□ 0.37
RETP07949 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.39■□□□□ 0.37
RETP07949 AC012645.4-201ENST00000610691 1061 ntBASIC17.39■□□□□ 0.37
RETP07949 GGTLC5P-201ENST00000617623 998 ntBASIC17.39■□□□□ 0.37
RETP07949 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.39■□□□□ 0.37
RETP07949 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
RETP07949 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RETP07949 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RETP07949 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RETP07949 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RETP07949 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RETP07949 REXO1L9P-201ENST00000604264 2108 ntBASIC17.39■□□□□ 0.37
RETP07949 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.39■□□□□ 0.37
RETP07949 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RETP07949 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RETP07949 AL121761.2-201ENST00000598007 1648 ntBASIC17.39■□□□□ 0.37
RETP07949 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RETP07949 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.39■□□□□ 0.37
RETP07949 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms