Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN1P07384 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.05■□□□□ 0.32
CAPN1P07384 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CAPN1P07384 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CAPN1P07384 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.05■□□□□ 0.32
CAPN1P07384 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.05■□□□□ 0.32
CAPN1P07384 AC005336.2-201ENST00000593183 939 ntBASIC17.05■□□□□ 0.32
CAPN1P07384 AL121912.1-201ENST00000603683 238 ntBASIC17.05■□□□□ 0.32
CAPN1P07384 REXO1L6P-202ENST00000619970 1078 ntBASIC17.05■□□□□ 0.32
CAPN1P07384 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN1P07384 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CAPN1P07384 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN1P07384 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CAPN1P07384 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN1P07384 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN1P07384 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN1P07384 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CAPN1P07384 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CAPN1P07384 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN1P07384 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CAPN1P07384 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN1P07384 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN1P07384 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN1P07384 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN1P07384 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN1P07384 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CAPN1P07384 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN1P07384 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN1P07384 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.04■□□□□ 0.32
CAPN1P07384 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.04■□□□□ 0.32
CAPN1P07384 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.04■□□□□ 0.32
CAPN1P07384 AC106795.1-205ENST00000512851 1056 ntBASIC17.04■□□□□ 0.32
CAPN1P07384 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN1P07384 AF238378.1-201ENST00000526806 358 ntBASIC17.04■□□□□ 0.32
CAPN1P07384 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN1P07384 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.04■□□□□ 0.32
CAPN1P07384 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.04■□□□□ 0.32
CAPN1P07384 SLC25A6P4-201ENST00000586535 553 ntBASIC17.04■□□□□ 0.32
CAPN1P07384 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.04■□□□□ 0.32
CAPN1P07384 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.04■□□□□ 0.32
CAPN1P07384 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN1P07384 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CAPN1P07384 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.04■□□□□ 0.32
CAPN1P07384 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CAPN1P07384 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CAPN1P07384 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN1P07384 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.04■□□□□ 0.32
CAPN1P07384 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN1P07384 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN1P07384 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN1P07384 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.04■□□□□ 0.32
CAPN1P07384 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN1P07384 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CAPN1P07384 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN1P07384 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN1P07384 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.04■□□□□ 0.32
CAPN1P07384 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN1P07384 AC016396.2-201ENST00000562575 1417 ntBASIC17.04■□□□□ 0.32
CAPN1P07384 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN1P07384 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CAPN1P07384 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.03■□□□□ 0.32
CAPN1P07384 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CAPN1P07384 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CAPN1P07384 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.03■□□□□ 0.32
CAPN1P07384 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN1P07384 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN1P07384 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN1P07384 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.03■□□□□ 0.32
CAPN1P07384 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.03■□□□□ 0.32
CAPN1P07384 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN1P07384 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CAPN1P07384 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CAPN1P07384 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.03■□□□□ 0.32
CAPN1P07384 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN1P07384 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN1P07384 SAPCD2P3-201ENST00000455031 850 ntBASIC17.03■□□□□ 0.32
CAPN1P07384 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.03■□□□□ 0.32
CAPN1P07384 MIR5100-201ENST00000579544 119 ntBASIC17.03■□□□□ 0.32
CAPN1P07384 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN1P07384 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.03■□□□□ 0.32
CAPN1P07384 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN1P07384 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.03■□□□□ 0.32
CAPN1P07384 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN1P07384 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN1P07384 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN1P07384 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.03■□□□□ 0.32
CAPN1P07384 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
CAPN1P07384 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN1P07384 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN1P07384 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN1P07384 AC010460.3-201ENST00000511359 1579 ntBASIC17.02■□□□□ 0.32
CAPN1P07384 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN1P07384 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN1P07384 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN1P07384 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN1P07384 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN1P07384 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CAPN1P07384 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.02■□□□□ 0.32
CAPN1P07384 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN1P07384 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms