Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
POLR3DP05423 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR3DP05423 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR3DP05423 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR3DP05423 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR3DP05423 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR3DP05423 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR3DP05423 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR3DP05423 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.65■□□□□ 0.9
POLR3DP05423 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.65■□□□□ 0.9
POLR3DP05423 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.65■□□□□ 0.9
POLR3DP05423 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
POLR3DP05423 AL353135.1-201ENST00000606729 504 ntBASIC20.65■□□□□ 0.9
POLR3DP05423 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR3DP05423 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR3DP05423 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR3DP05423 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR3DP05423 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR3DP05423 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR3DP05423 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR3DP05423 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR3DP05423 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR3DP05423 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
POLR3DP05423 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
POLR3DP05423 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
POLR3DP05423 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLR3DP05423 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.64■□□□□ 0.89
POLR3DP05423 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLR3DP05423 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
POLR3DP05423 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
POLR3DP05423 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
POLR3DP05423 KRT18P13-201ENST00000400056 1290 ntBASIC20.64■□□□□ 0.89
POLR3DP05423 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.64■□□□□ 0.89
POLR3DP05423 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.64■□□□□ 0.89
POLR3DP05423 PGAM5P1-201ENST00000518923 814 ntBASIC20.64■□□□□ 0.89
POLR3DP05423 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.64■□□□□ 0.89
POLR3DP05423 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.64■□□□□ 0.89
POLR3DP05423 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.64■□□□□ 0.89
POLR3DP05423 AL139327.4-201ENST00000612362 153 ntBASIC20.64■□□□□ 0.89
POLR3DP05423 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLR3DP05423 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
POLR3DP05423 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
POLR3DP05423 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLR3DP05423 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLR3DP05423 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.64■□□□□ 0.89
POLR3DP05423 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR3DP05423 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR3DP05423 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.63■□□□□ 0.89
POLR3DP05423 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
POLR3DP05423 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR3DP05423 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.63■□□□□ 0.89
POLR3DP05423 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR3DP05423 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.63■□□□□ 0.89
POLR3DP05423 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.63■□□□□ 0.89
POLR3DP05423 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.63■□□□□ 0.89
POLR3DP05423 RNA5SP416-201ENST00000516838 111 ntBASIC20.63■□□□□ 0.89
POLR3DP05423 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.63■□□□□ 0.89
POLR3DP05423 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.63■□□□□ 0.89
POLR3DP05423 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR3DP05423 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.63■□□□□ 0.89
POLR3DP05423 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.63■□□□□ 0.89
POLR3DP05423 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.63■□□□□ 0.89
POLR3DP05423 GPALPP1-207ENST00000611650 899 ntBASIC20.63■□□□□ 0.89
POLR3DP05423 AC006538.3-201ENST00000612495 578 ntBASIC20.63■□□□□ 0.89
POLR3DP05423 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR3DP05423 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR3DP05423 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
POLR3DP05423 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR3DP05423 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
POLR3DP05423 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR3DP05423 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR3DP05423 LINC00304-203ENST00000565008 1864 ntBASIC20.62■□□□□ 0.89
POLR3DP05423 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.62■□□□□ 0.89
POLR3DP05423 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.62■□□□□ 0.89
POLR3DP05423 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.62■□□□□ 0.89
POLR3DP05423 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
POLR3DP05423 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR3DP05423 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR3DP05423 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.62■□□□□ 0.89
POLR3DP05423 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
POLR3DP05423 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.62■□□□□ 0.89
POLR3DP05423 PTCHD3P3-201ENST00000403073 906 ntBASIC20.62■□□□□ 0.89
POLR3DP05423 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR3DP05423 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.62■□□□□ 0.89
POLR3DP05423 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.62■□□□□ 0.89
POLR3DP05423 IGHV3-65-201ENST00000523210 341 ntBASIC20.62■□□□□ 0.89
POLR3DP05423 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.62■□□□□ 0.89
POLR3DP05423 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.62■□□□□ 0.89
POLR3DP05423 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.62■□□□□ 0.89
POLR3DP05423 AC008667.4-201ENST00000607370 168 ntBASIC20.62■□□□□ 0.89
POLR3DP05423 AC139713.2-201ENST00000641328 2723 ntBASIC20.62■□□□□ 0.89
POLR3DP05423 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR3DP05423 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR3DP05423 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR3DP05423 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
POLR3DP05423 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
POLR3DP05423 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR3DP05423 GPR89P-201ENST00000407924 1495 ntBASIC20.62■□□□□ 0.89
POLR3DP05423 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR3DP05423 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms