Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 AC079776.4-201ENST00000511039 504 ntBASIC17.49■□□□□ 0.39
PRAMEF11O60813 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PRAMEF11O60813 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.49■□□□□ 0.39
PRAMEF11O60813 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.49■□□□□ 0.39
PRAMEF11O60813 AC005593.1-201ENST00000624894 515 ntBASIC17.49■□□□□ 0.39
PRAMEF11O60813 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF11O60813 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF11O60813 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF11O60813 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF11O60813 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PRAMEF11O60813 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF11O60813 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF11O60813 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.49■□□□□ 0.39
PRAMEF11O60813 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF11O60813 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF11O60813 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PRAMEF11O60813 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PRAMEF11O60813 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF11O60813 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PRAMEF11O60813 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF11O60813 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF11O60813 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF11O60813 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF11O60813 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF11O60813 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF11O60813 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF11O60813 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF11O60813 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF11O60813 IGHV3-22-201ENST00000520721 359 ntBASIC17.48■□□□□ 0.39
PRAMEF11O60813 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
PRAMEF11O60813 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.48■□□□□ 0.39
PRAMEF11O60813 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
PRAMEF11O60813 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PRAMEF11O60813 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.48■□□□□ 0.39
PRAMEF11O60813 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF11O60813 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF11O60813 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF11O60813 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF11O60813 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
PRAMEF11O60813 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF11O60813 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.48■□□□□ 0.39
PRAMEF11O60813 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF11O60813 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF11O60813 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.48■□□□□ 0.39
PRAMEF11O60813 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF11O60813 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF11O60813 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PRAMEF11O60813 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PRAMEF11O60813 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF11O60813 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF11O60813 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PRAMEF11O60813 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF11O60813 AP001094.4-201ENST00000579008 2176 ntBASIC17.47■□□□□ 0.39
PRAMEF11O60813 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF11O60813 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF11O60813 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF11O60813 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF11O60813 FRMD8P1-201ENST00000440433 1524 ntBASIC17.47■□□□□ 0.39
PRAMEF11O60813 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF11O60813 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF11O60813 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF11O60813 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF11O60813 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF11O60813 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PRAMEF11O60813 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF11O60813 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.47■□□□□ 0.39
PRAMEF11O60813 PAWRP1-201ENST00000451083 565 ntBASIC17.47■□□□□ 0.39
PRAMEF11O60813 IGHV3-65-201ENST00000523210 341 ntBASIC17.47■□□□□ 0.39
PRAMEF11O60813 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.47■□□□□ 0.39
PRAMEF11O60813 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
PRAMEF11O60813 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.47■□□□□ 0.39
PRAMEF11O60813 AC008667.4-201ENST00000607370 168 ntBASIC17.47■□□□□ 0.39
PRAMEF11O60813 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.47■□□□□ 0.39
PRAMEF11O60813 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF11O60813 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF11O60813 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.47■□□□□ 0.39
PRAMEF11O60813 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PRAMEF11O60813 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF11O60813 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF11O60813 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PRAMEF11O60813 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PRAMEF11O60813 AC092053.1-201ENST00000605787 1936 ntBASIC17.47■□□□□ 0.39
PRAMEF11O60813 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PRAMEF11O60813 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEF11O60813 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.46■□□□□ 0.39
PRAMEF11O60813 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PRAMEF11O60813 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
PRAMEF11O60813 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.46■□□□□ 0.39
PRAMEF11O60813 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.46■□□□□ 0.39
PRAMEF11O60813 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.46■□□□□ 0.39
PRAMEF11O60813 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.46■□□□□ 0.39
PRAMEF11O60813 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEF11O60813 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEF11O60813 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PRAMEF11O60813 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEF11O60813 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEF11O60813 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PRAMEF11O60813 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.46■□□□□ 0.39
PRAMEF11O60813 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.46■□□□□ 0.39
PRAMEF11O60813 AC124947.2-201ENST00000547118 1133 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms