Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TSPAN3O60637 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TSPAN3O60637 GNAS-203ENST00000306120 1878 ntBASIC17.81■□□□□ 0.44
TSPAN3O60637 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TSPAN3O60637 GPR89P-201ENST00000407924 1495 ntBASIC17.81■□□□□ 0.44
TSPAN3O60637 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
TSPAN3O60637 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TSPAN3O60637 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TSPAN3O60637 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TSPAN3O60637 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TSPAN3O60637 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.8■□□□□ 0.44
TSPAN3O60637 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TSPAN3O60637 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.8■□□□□ 0.44
TSPAN3O60637 AL590787.1-201ENST00000568856 1315 ntBASIC17.8■□□□□ 0.44
TSPAN3O60637 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TSPAN3O60637 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.8■□□□□ 0.44
TSPAN3O60637 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TSPAN3O60637 KRT18P13-201ENST00000400056 1290 ntBASIC17.8■□□□□ 0.44
TSPAN3O60637 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.8■□□□□ 0.44
TSPAN3O60637 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.8■□□□□ 0.44
TSPAN3O60637 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TSPAN3O60637 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.8■□□□□ 0.44
TSPAN3O60637 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.8■□□□□ 0.44
TSPAN3O60637 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.8■□□□□ 0.44
TSPAN3O60637 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.8■□□□□ 0.44
TSPAN3O60637 AC139530.3-201ENST00000620344 690 ntBASIC17.8■□□□□ 0.44
TSPAN3O60637 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.8■□□□□ 0.44
TSPAN3O60637 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TSPAN3O60637 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TSPAN3O60637 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TSPAN3O60637 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
TSPAN3O60637 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TSPAN3O60637 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TSPAN3O60637 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TSPAN3O60637 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TSPAN3O60637 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
TSPAN3O60637 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TSPAN3O60637 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TSPAN3O60637 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TSPAN3O60637 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.79■□□□□ 0.44
TSPAN3O60637 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TSPAN3O60637 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.79■□□□□ 0.44
TSPAN3O60637 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TSPAN3O60637 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TSPAN3O60637 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TSPAN3O60637 PI4KAP1-204ENST00000612579 1703 ntBASIC17.79■□□□□ 0.44
TSPAN3O60637 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TSPAN3O60637 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TSPAN3O60637 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TSPAN3O60637 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TSPAN3O60637 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.79■□□□□ 0.44
TSPAN3O60637 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.79■□□□□ 0.44
TSPAN3O60637 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.79■□□□□ 0.44
TSPAN3O60637 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.79■□□□□ 0.44
TSPAN3O60637 IGHV3-65-201ENST00000523210 341 ntBASIC17.79■□□□□ 0.44
TSPAN3O60637 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.79■□□□□ 0.44
TSPAN3O60637 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.79■□□□□ 0.44
TSPAN3O60637 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.79■□□□□ 0.44
TSPAN3O60637 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.79■□□□□ 0.44
TSPAN3O60637 AC008667.4-201ENST00000607370 168 ntBASIC17.79■□□□□ 0.44
TSPAN3O60637 FAM197Y3-203ENST00000618346 717 ntBASIC17.79■□□□□ 0.44
TSPAN3O60637 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TSPAN3O60637 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TSPAN3O60637 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.79■□□□□ 0.44
TSPAN3O60637 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
TSPAN3O60637 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TSPAN3O60637 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TSPAN3O60637 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.79■□□□□ 0.44
TSPAN3O60637 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TSPAN3O60637 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.78■□□□□ 0.44
TSPAN3O60637 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.78■□□□□ 0.44
TSPAN3O60637 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TSPAN3O60637 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.78■□□□□ 0.44
TSPAN3O60637 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TSPAN3O60637 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TSPAN3O60637 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TSPAN3O60637 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
TSPAN3O60637 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
TSPAN3O60637 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.78■□□□□ 0.44
TSPAN3O60637 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TSPAN3O60637 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TSPAN3O60637 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TSPAN3O60637 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TSPAN3O60637 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
TSPAN3O60637 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TSPAN3O60637 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
TSPAN3O60637 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.78■□□□□ 0.44
TSPAN3O60637 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TSPAN3O60637 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.78■□□□□ 0.44
TSPAN3O60637 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.78■□□□□ 0.44
TSPAN3O60637 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TSPAN3O60637 AL805961.1-202ENST00000641562 540 ntBASIC17.78■□□□□ 0.44
TSPAN3O60637 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TSPAN3O60637 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TSPAN3O60637 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.78■□□□□ 0.44
TSPAN3O60637 AC026471.1-201ENST00000564629 3026 ntBASIC17.78■□□□□ 0.44
TSPAN3O60637 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TSPAN3O60637 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TSPAN3O60637 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.78■□□□□ 0.44
TSPAN3O60637 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms