Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF9O43307 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ARHGEF9O43307 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF9O43307 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
ARHGEF9O43307 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ARHGEF9O43307 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF9O43307 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF9O43307 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF9O43307 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF9O43307 AL645929.1-201ENST00000420084 975 ntBASIC16.1■□□□□ 0.17
ARHGEF9O43307 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF9O43307 BX276092.5-203ENST00000456199 560 ntBASIC16.1■□□□□ 0.17
ARHGEF9O43307 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.1■□□□□ 0.17
ARHGEF9O43307 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.1■□□□□ 0.17
ARHGEF9O43307 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.1■□□□□ 0.17
ARHGEF9O43307 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.1■□□□□ 0.17
ARHGEF9O43307 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
ARHGEF9O43307 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF9O43307 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ARHGEF9O43307 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF9O43307 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
ARHGEF9O43307 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF9O43307 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.1■□□□□ 0.17
ARHGEF9O43307 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF9O43307 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF9O43307 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.1■□□□□ 0.17
ARHGEF9O43307 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF9O43307 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF9O43307 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
ARHGEF9O43307 AC100803.2-201ENST00000562459 1963 ntBASIC16.09■□□□□ 0.17
ARHGEF9O43307 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF9O43307 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF9O43307 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF9O43307 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.09■□□□□ 0.17
ARHGEF9O43307 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF9O43307 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ARHGEF9O43307 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF9O43307 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF9O43307 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF9O43307 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF9O43307 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF9O43307 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF9O43307 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.09■□□□□ 0.17
ARHGEF9O43307 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.09■□□□□ 0.17
ARHGEF9O43307 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.09■□□□□ 0.17
ARHGEF9O43307 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.09■□□□□ 0.17
ARHGEF9O43307 AL121672.3-201ENST00000608644 468 ntBASIC16.09■□□□□ 0.17
ARHGEF9O43307 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF9O43307 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF9O43307 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.09■□□□□ 0.17
ARHGEF9O43307 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF9O43307 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
ARHGEF9O43307 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF9O43307 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF9O43307 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.09■□□□□ 0.17
ARHGEF9O43307 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF9O43307 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
ARHGEF9O43307 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
ARHGEF9O43307 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF9O43307 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ARHGEF9O43307 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
ARHGEF9O43307 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ARHGEF9O43307 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.08■□□□□ 0.17
ARHGEF9O43307 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ARHGEF9O43307 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
ARHGEF9O43307 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ARHGEF9O43307 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ARHGEF9O43307 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ARHGEF9O43307 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
ARHGEF9O43307 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.08■□□□□ 0.17
ARHGEF9O43307 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
ARHGEF9O43307 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
ARHGEF9O43307 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
ARHGEF9O43307 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.08■□□□□ 0.16
ARHGEF9O43307 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ARHGEF9O43307 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ARHGEF9O43307 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ARHGEF9O43307 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.08■□□□□ 0.16
ARHGEF9O43307 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ARHGEF9O43307 AC246785.2-201ENST00000432512 513 ntBASIC16.08■□□□□ 0.16
ARHGEF9O43307 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
ARHGEF9O43307 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.08■□□□□ 0.16
ARHGEF9O43307 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ARHGEF9O43307 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.08■□□□□ 0.16
ARHGEF9O43307 LINC01711-201ENST00000598340 967 ntBASIC16.08■□□□□ 0.16
ARHGEF9O43307 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.08■□□□□ 0.16
ARHGEF9O43307 NPAP1P7-201ENST00000613027 823 ntBASIC16.08■□□□□ 0.16
ARHGEF9O43307 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.08■□□□□ 0.16
ARHGEF9O43307 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.08■□□□□ 0.16
ARHGEF9O43307 LINC00167-201ENST00000530583 1419 ntBASIC16.08■□□□□ 0.16
ARHGEF9O43307 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.08■□□□□ 0.16
ARHGEF9O43307 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
ARHGEF9O43307 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.08■□□□□ 0.16
ARHGEF9O43307 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
ARHGEF9O43307 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
ARHGEF9O43307 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.08■□□□□ 0.16
ARHGEF9O43307 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.07■□□□□ 0.16
ARHGEF9O43307 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ARHGEF9O43307 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARHGEF9O43307 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms