Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
HFM1A2PYH4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
HFM1A2PYH4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
HFM1A2PYH4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
HFM1A2PYH4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
HFM1A2PYH4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
HFM1A2PYH4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
HFM1A2PYH4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
HFM1A2PYH4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC25.3■■□□□ 1.64
HFM1A2PYH4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
HFM1A2PYH4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HFM1A2PYH4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
HFM1A2PYH4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
HFM1A2PYH4 AC004967.1-201ENST00000453589 447 ntBASIC25.3■■□□□ 1.64
HFM1A2PYH4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC25.3■■□□□ 1.64
HFM1A2PYH4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
HFM1A2PYH4 MIR4515-201ENST00000584082 81 ntBASIC25.3■■□□□ 1.64
HFM1A2PYH4 AP001160.2-201ENST00000596071 487 ntBASIC25.3■■□□□ 1.64
HFM1A2PYH4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC25.3■■□□□ 1.64
HFM1A2PYH4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
HFM1A2PYH4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
HFM1A2PYH4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HFM1A2PYH4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HFM1A2PYH4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
HFM1A2PYH4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
HFM1A2PYH4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HFM1A2PYH4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC25.3■■□□□ 1.64
HFM1A2PYH4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
HFM1A2PYH4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
HFM1A2PYH4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HFM1A2PYH4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HFM1A2PYH4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC25.3■■□□□ 1.64
HFM1A2PYH4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
HFM1A2PYH4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HFM1A2PYH4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC25.29■■□□□ 1.64
HFM1A2PYH4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
HFM1A2PYH4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
HFM1A2PYH4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC25.29■■□□□ 1.64
HFM1A2PYH4 HCG4-201ENST00000418983 998 ntBASIC25.29■■□□□ 1.64
HFM1A2PYH4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC25.29■■□□□ 1.64
HFM1A2PYH4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC25.29■■□□□ 1.64
HFM1A2PYH4 MIR4492-201ENST00000581627 80 ntBASIC25.29■■□□□ 1.64
HFM1A2PYH4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC25.29■■□□□ 1.64
HFM1A2PYH4 AL121761.2-201ENST00000598007 1648 ntBASIC25.29■■□□□ 1.64
HFM1A2PYH4 ELL2P1-201ENST00000413990 1906 ntBASIC25.29■■□□□ 1.64
HFM1A2PYH4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
HFM1A2PYH4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
HFM1A2PYH4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC25.29■■□□□ 1.64
HFM1A2PYH4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC25.29■■□□□ 1.64
HFM1A2PYH4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
HFM1A2PYH4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
HFM1A2PYH4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC25.29■■□□□ 1.64
HFM1A2PYH4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
HFM1A2PYH4 AC108860.2-201ENST00000562760 2183 ntBASIC25.29■■□□□ 1.64
HFM1A2PYH4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
HFM1A2PYH4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC25.29■■□□□ 1.64
HFM1A2PYH4 PMS2P2-201ENST00000425039 1128 ntBASIC25.29■■□□□ 1.64
HFM1A2PYH4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC25.29■■□□□ 1.64
HFM1A2PYH4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC25.29■■□□□ 1.64
HFM1A2PYH4 MIR3909-201ENST00000579518 119 ntBASIC25.29■■□□□ 1.64
HFM1A2PYH4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC25.28■■□□□ 1.64
HFM1A2PYH4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
HFM1A2PYH4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC25.28■■□□□ 1.64
HFM1A2PYH4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
HFM1A2PYH4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HFM1A2PYH4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
HFM1A2PYH4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HFM1A2PYH4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
HFM1A2PYH4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
HFM1A2PYH4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
HFM1A2PYH4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HFM1A2PYH4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
HFM1A2PYH4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC25.28■■□□□ 1.64
HFM1A2PYH4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
HFM1A2PYH4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
HFM1A2PYH4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
HFM1A2PYH4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HFM1A2PYH4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
HFM1A2PYH4 HMGA1P7-201ENST00000406908 502 ntBASIC25.28■■□□□ 1.64
HFM1A2PYH4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC25.28■■□□□ 1.64
HFM1A2PYH4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC25.28■■□□□ 1.64
HFM1A2PYH4 HTR5BP-201ENST00000430851 1154 ntBASIC25.28■■□□□ 1.64
HFM1A2PYH4 FAM58CP-201ENST00000435741 640 ntBASIC25.28■■□□□ 1.64
HFM1A2PYH4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
HFM1A2PYH4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC25.28■■□□□ 1.64
HFM1A2PYH4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
HFM1A2PYH4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC25.28■■□□□ 1.64
HFM1A2PYH4 AL031432.2-201ENST00000566714 459 ntBASIC25.28■■□□□ 1.64
HFM1A2PYH4 AL928711.1-201ENST00000570165 459 ntBASIC25.28■■□□□ 1.64
HFM1A2PYH4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
HFM1A2PYH4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC25.28■■□□□ 1.64
HFM1A2PYH4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
HFM1A2PYH4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
HFM1A2PYH4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
HFM1A2PYH4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
HFM1A2PYH4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC25.27■■□□□ 1.64
HFM1A2PYH4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
HFM1A2PYH4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC25.27■■□□□ 1.64
HFM1A2PYH4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
HFM1A2PYH4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms