Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA1Q9Y5H4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA1Q9Y5H4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGA1Q9Y5H4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA1Q9Y5H4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA1Q9Y5H4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA1Q9Y5H4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA1Q9Y5H4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 KRT8P48-201ENST00000515599 1220 ntBASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA1Q9Y5H4 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 AKAP8P1-201ENST00000434743 1349 ntBASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 TERF1P3-201ENST00000505638 1227 ntBASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGA1Q9Y5H4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA1Q9Y5H4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCDHGA1Q9Y5H4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGA1Q9Y5H4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGA1Q9Y5H4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGA1Q9Y5H4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PCDHGA1Q9Y5H4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA1Q9Y5H4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PCDHGA1Q9Y5H4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGA1Q9Y5H4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms