Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 AC092910.1-201ENST00000482027 1129 ntBASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 AC010327.4-202ENST00000591484 748 ntBASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 AD001527.2-201ENST00000622994 785 ntBASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 AC003669.1-201ENST00000334569 611 ntBASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 AC098831.1-202ENST00000438821 336 ntBASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 AC012640.2-201ENST00000561606 901 ntBASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 AC034105.1-201ENST00000563488 319 ntBASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 AP005117.1-201ENST00000584346 1413 ntBASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB1Q9Y5F3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms