Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
ZC3H4Q9UPT8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZC3H4Q9UPT8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZC3H4Q9UPT8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZC3H4Q9UPT8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.77■□□□□ 0.92
ZC3H4Q9UPT8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZC3H4Q9UPT8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZC3H4Q9UPT8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.77■□□□□ 0.92
ZC3H4Q9UPT8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
ZC3H4Q9UPT8 AC100803.2-201ENST00000562459 1963 ntBASIC20.77■□□□□ 0.92
ZC3H4Q9UPT8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZC3H4Q9UPT8 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.77■□□□□ 0.91
ZC3H4Q9UPT8 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.77■□□□□ 0.91
ZC3H4Q9UPT8 AC027369.6-201ENST00000525520 931 ntBASIC20.77■□□□□ 0.91
ZC3H4Q9UPT8 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ZC3H4Q9UPT8 AC106886.1-201ENST00000568660 600 ntBASIC20.77■□□□□ 0.91
ZC3H4Q9UPT8 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC20.77■□□□□ 0.91
ZC3H4Q9UPT8 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC20.77■□□□□ 0.91
ZC3H4Q9UPT8 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.77■□□□□ 0.91
ZC3H4Q9UPT8 MIR6805-201ENST00000615055 62 ntBASIC20.77■□□□□ 0.91
ZC3H4Q9UPT8 AC008267.7-201ENST00000624570 1194 ntBASIC20.77■□□□□ 0.91
ZC3H4Q9UPT8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZC3H4Q9UPT8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZC3H4Q9UPT8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 AC138969.3-201ENST00000546612 1459 ntBASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 AC138932.2-201ENST00000548268 1459 ntBASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 AC126755.4-201ENST00000549796 1459 ntBASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 AP000842.3-202ENST00000569238 1080 ntBASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 AC140912.1-201ENST00000577171 1054 ntBASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ZC3H4Q9UPT8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
ZC3H4Q9UPT8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZC3H4Q9UPT8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZC3H4Q9UPT8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZC3H4Q9UPT8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.75■□□□□ 0.91
ZC3H4Q9UPT8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZC3H4Q9UPT8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZC3H4Q9UPT8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZC3H4Q9UPT8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZC3H4Q9UPT8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.75■□□□□ 0.91
ZC3H4Q9UPT8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ZC3H4Q9UPT8 MIR346-201ENST00000362234 95 ntBASIC20.75■□□□□ 0.91
ZC3H4Q9UPT8 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.75■□□□□ 0.91
ZC3H4Q9UPT8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZC3H4Q9UPT8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZC3H4Q9UPT8 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.75■□□□□ 0.91
ZC3H4Q9UPT8 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZC3H4Q9UPT8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
ZC3H4Q9UPT8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
ZC3H4Q9UPT8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZC3H4Q9UPT8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.75■□□□□ 0.91
ZC3H4Q9UPT8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.74■□□□□ 0.91
ZC3H4Q9UPT8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZC3H4Q9UPT8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.74■□□□□ 0.91
ZC3H4Q9UPT8 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.74■□□□□ 0.91
ZC3H4Q9UPT8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ZC3H4Q9UPT8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ZC3H4Q9UPT8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZC3H4Q9UPT8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ZC3H4Q9UPT8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZC3H4Q9UPT8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZC3H4Q9UPT8 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZC3H4Q9UPT8 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZC3H4Q9UPT8 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
ZC3H4Q9UPT8 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.74■□□□□ 0.91
ZC3H4Q9UPT8 MIR1909-201ENST00000411312 80 ntBASIC20.74■□□□□ 0.91
ZC3H4Q9UPT8 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.74■□□□□ 0.91
ZC3H4Q9UPT8 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
ZC3H4Q9UPT8 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
ZC3H4Q9UPT8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms