Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPO2Q9UMS6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPO2Q9UMS6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNPO2Q9UMS6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPO2Q9UMS6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNPO2Q9UMS6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPO2Q9UMS6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPO2Q9UMS6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPO2Q9UMS6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPO2Q9UMS6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.75■□□□□ 0.75
SYNPO2Q9UMS6 HMGA1P7-201ENST00000406908 502 ntBASIC19.75■□□□□ 0.75
SYNPO2Q9UMS6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNPO2Q9UMS6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNPO2Q9UMS6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNPO2Q9UMS6 AC105339.1-204ENST00000636249 355 ntBASIC19.75■□□□□ 0.75
SYNPO2Q9UMS6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.75■□□□□ 0.75
SYNPO2Q9UMS6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNPO2Q9UMS6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNPO2Q9UMS6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPO2Q9UMS6 AC012569.1-201ENST00000591191 1524 ntBASIC19.75■□□□□ 0.75
SYNPO2Q9UMS6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPO2Q9UMS6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPO2Q9UMS6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 AL021920.2-201ENST00000624828 1351 ntBASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 AL355306.1-201ENST00000415580 579 ntBASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 PMS2P2-201ENST00000425039 1128 ntBASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 AC099522.2-201ENST00000607001 744 ntBASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 KRT8P49-201ENST00000604166 1432 ntBASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.74■□□□□ 0.75
SYNPO2Q9UMS6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 AL596442.2-201ENST00000610240 980 ntBASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 LINC02012-201ENST00000608206 1725 ntBASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNPO2Q9UMS6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms