Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 KRT17P7-201ENST00000451704 1104 ntBASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 CU639417.3-201ENST00000624240 1404 ntBASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXXC1Q9P0U4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CXXC1Q9P0U4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.36■□□□□ 0.53
CXXC1Q9P0U4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CXXC1Q9P0U4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CXXC1Q9P0U4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CXXC1Q9P0U4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CXXC1Q9P0U4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.36■□□□□ 0.53
CXXC1Q9P0U4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.36■□□□□ 0.53
CXXC1Q9P0U4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.36■□□□□ 0.53
CXXC1Q9P0U4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.36■□□□□ 0.53
CXXC1Q9P0U4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.36■□□□□ 0.53
CXXC1Q9P0U4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CXXC1Q9P0U4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CXXC1Q9P0U4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.36■□□□□ 0.53
CXXC1Q9P0U4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.36■□□□□ 0.53
CXXC1Q9P0U4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.36■□□□□ 0.53
CXXC1Q9P0U4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CXXC1Q9P0U4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.36■□□□□ 0.53
CXXC1Q9P0U4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CXXC1Q9P0U4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 AL139327.4-201ENST00000612362 153 ntBASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 SPDYE12P-201ENST00000618416 771 ntBASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms