Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
PARPBPQ9NWS1 AL139288.1-201ENST00000623748 933 ntBASIC15.52■□□□□ 0.08
PARPBPQ9NWS1 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
PARPBPQ9NWS1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.52■□□□□ 0.08
PARPBPQ9NWS1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PARPBPQ9NWS1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PARPBPQ9NWS1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.52■□□□□ 0.07
PARPBPQ9NWS1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PARPBPQ9NWS1 AL356309.3-201ENST00000624132 1934 ntBASIC15.52■□□□□ 0.07
PARPBPQ9NWS1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PARPBPQ9NWS1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PARPBPQ9NWS1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PARPBPQ9NWS1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.52■□□□□ 0.07
PARPBPQ9NWS1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PARPBPQ9NWS1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PARPBPQ9NWS1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.52■□□□□ 0.07
PARPBPQ9NWS1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
PARPBPQ9NWS1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 SIGLEC16-201ENST00000599858 1437 ntBASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 AC079776.2-201ENST00000641154 1609 ntBASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 EMBP1-201ENST00000458200 901 ntBASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PARPBPQ9NWS1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 AC132938.5-201ENST00000624980 1813 ntBASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 SPDYE21P-201ENST00000413323 827 ntBASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 PRYP5-201ENST00000451909 266 ntBASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 AF238378.1-201ENST00000526806 358 ntBASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 AL121912.1-201ENST00000603683 238 ntBASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 AC064862.7-201ENST00000604520 867 ntBASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 AC073592.4-201ENST00000623827 446 ntBASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms