Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.57■□□□□ 0.24
PIF1Q9H611 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PIF1Q9H611 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PIF1Q9H611 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PIF1Q9H611 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PIF1Q9H611 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PIF1Q9H611 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PIF1Q9H611 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PIF1Q9H611 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.57■□□□□ 0.24
PIF1Q9H611 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PIF1Q9H611 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PIF1Q9H611 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.57■□□□□ 0.24
PIF1Q9H611 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PIF1Q9H611 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.57■□□□□ 0.24
PIF1Q9H611 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.57■□□□□ 0.24
PIF1Q9H611 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PIF1Q9H611 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PIF1Q9H611 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.57■□□□□ 0.24
PIF1Q9H611 TSPY12P-201ENST00000421279 868 ntBASIC16.57■□□□□ 0.24
PIF1Q9H611 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.57■□□□□ 0.24
PIF1Q9H611 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.57■□□□□ 0.24
PIF1Q9H611 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.57■□□□□ 0.24
PIF1Q9H611 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PIF1Q9H611 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.57■□□□□ 0.24
PIF1Q9H611 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
PIF1Q9H611 AC141257.4-201ENST00000634557 245 ntBASIC16.57■□□□□ 0.24
PIF1Q9H611 AC136944.6-201ENST00000634818 245 ntBASIC16.57■□□□□ 0.24
PIF1Q9H611 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PIF1Q9H611 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
PIF1Q9H611 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PIF1Q9H611 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PIF1Q9H611 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PIF1Q9H611 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PIF1Q9H611 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
PIF1Q9H611 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.57■□□□□ 0.24
PIF1Q9H611 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.57■□□□□ 0.24
PIF1Q9H611 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.57■□□□□ 0.24
PIF1Q9H611 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PIF1Q9H611 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
PIF1Q9H611 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PIF1Q9H611 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PIF1Q9H611 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PIF1Q9H611 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PIF1Q9H611 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PIF1Q9H611 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PIF1Q9H611 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PIF1Q9H611 AL662844.4-201ENST00000606367 2838 ntBASIC16.56■□□□□ 0.24
PIF1Q9H611 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PIF1Q9H611 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PIF1Q9H611 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.56■□□□□ 0.24
PIF1Q9H611 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PIF1Q9H611 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PIF1Q9H611 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.56■□□□□ 0.24
PIF1Q9H611 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.56■□□□□ 0.24
PIF1Q9H611 AL391807.1-203ENST00000604392 2365 ntBASIC16.56■□□□□ 0.24
PIF1Q9H611 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PIF1Q9H611 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.56■□□□□ 0.24
PIF1Q9H611 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PIF1Q9H611 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PIF1Q9H611 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PIF1Q9H611 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PIF1Q9H611 AL137013.1-201ENST00000432946 1228 ntBASIC16.56■□□□□ 0.24
PIF1Q9H611 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.56■□□□□ 0.24
PIF1Q9H611 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.56■□□□□ 0.24
PIF1Q9H611 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PIF1Q9H611 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PIF1Q9H611 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PIF1Q9H611 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PIF1Q9H611 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.56■□□□□ 0.24
PIF1Q9H611 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PIF1Q9H611 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
PIF1Q9H611 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PIF1Q9H611 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.56■□□□□ 0.24
PIF1Q9H611 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.56■□□□□ 0.24
PIF1Q9H611 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PIF1Q9H611 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PIF1Q9H611 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PIF1Q9H611 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PIF1Q9H611 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PIF1Q9H611 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
PIF1Q9H611 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PIF1Q9H611 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PIF1Q9H611 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PIF1Q9H611 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PIF1Q9H611 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PIF1Q9H611 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PIF1Q9H611 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PIF1Q9H611 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
PIF1Q9H611 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.55■□□□□ 0.24
PIF1Q9H611 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.55■□□□□ 0.24
PIF1Q9H611 BX664615.1-201ENST00000443558 458 ntBASIC16.55■□□□□ 0.24
PIF1Q9H611 ATP5G1P1-201ENST00000448724 379 ntBASIC16.55■□□□□ 0.24
PIF1Q9H611 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.55■□□□□ 0.24
PIF1Q9H611 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.55■□□□□ 0.24
PIF1Q9H611 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.55■□□□□ 0.24
PIF1Q9H611 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.55■□□□□ 0.24
PIF1Q9H611 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.55■□□□□ 0.24
PIF1Q9H611 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PIF1Q9H611 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.55■□□□□ 0.24
PIF1Q9H611 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms