Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 MTCL1P1-201ENST00000446207 792 ntBASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHRDL1Q9BU40 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 AC022211.2-201ENST00000585075 2527 ntBASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms