Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NPAS1Q99742 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS1Q99742 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS1Q99742 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NPAS1Q99742 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.78■□□□□ 0.12
NPAS1Q99742 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS1Q99742 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NPAS1Q99742 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.78■□□□□ 0.12
NPAS1Q99742 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS1Q99742 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS1Q99742 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.77■□□□□ 0.12
NPAS1Q99742 SIGLEC16-201ENST00000599858 1437 ntBASIC15.77■□□□□ 0.12
NPAS1Q99742 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.77■□□□□ 0.12
NPAS1Q99742 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS1Q99742 AL162727.3-201ENST00000635661 2787 ntBASIC15.77■□□□□ 0.12
NPAS1Q99742 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS1Q99742 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS1Q99742 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS1Q99742 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS1Q99742 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS1Q99742 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.77■□□□□ 0.12
NPAS1Q99742 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS1Q99742 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.77■□□□□ 0.12
NPAS1Q99742 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS1Q99742 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS1Q99742 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS1Q99742 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS1Q99742 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS1Q99742 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS1Q99742 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS1Q99742 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS1Q99742 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.77■□□□□ 0.12
NPAS1Q99742 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS1Q99742 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.77■□□□□ 0.12
NPAS1Q99742 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.77■□□□□ 0.12
NPAS1Q99742 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.77■□□□□ 0.12
NPAS1Q99742 MYCLP1-201ENST00000372451 1075 ntBASIC15.77■□□□□ 0.12
NPAS1Q99742 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.77■□□□□ 0.12
NPAS1Q99742 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.77■□□□□ 0.12
NPAS1Q99742 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
NPAS1Q99742 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
NPAS1Q99742 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.77■□□□□ 0.12
NPAS1Q99742 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.77■□□□□ 0.12
NPAS1Q99742 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.77■□□□□ 0.12
NPAS1Q99742 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.77■□□□□ 0.12
NPAS1Q99742 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS1Q99742 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.77■□□□□ 0.12
NPAS1Q99742 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.77■□□□□ 0.12
NPAS1Q99742 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.77■□□□□ 0.12
NPAS1Q99742 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.77■□□□□ 0.12
NPAS1Q99742 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
NPAS1Q99742 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
NPAS1Q99742 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
NPAS1Q99742 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NPAS1Q99742 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NPAS1Q99742 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NPAS1Q99742 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NPAS1Q99742 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NPAS1Q99742 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.77■□□□□ 0.11
NPAS1Q99742 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NPAS1Q99742 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.77■□□□□ 0.11
NPAS1Q99742 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NPAS1Q99742 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
NPAS1Q99742 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS1Q99742 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS1Q99742 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.76■□□□□ 0.11
NPAS1Q99742 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS1Q99742 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS1Q99742 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS1Q99742 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS1Q99742 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
NPAS1Q99742 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.76■□□□□ 0.11
NPAS1Q99742 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS1Q99742 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS1Q99742 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NPAS1Q99742 SLC25A1P3-201ENST00000395415 828 ntBASIC15.76■□□□□ 0.11
NPAS1Q99742 MRPL3P1-201ENST00000400109 1033 ntBASIC15.76■□□□□ 0.11
NPAS1Q99742 HNRNPDP1-201ENST00000439535 754 ntBASIC15.76■□□□□ 0.11
NPAS1Q99742 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.76■□□□□ 0.11
NPAS1Q99742 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
NPAS1Q99742 AP002469.2-201ENST00000531724 424 ntBASIC15.76■□□□□ 0.11
NPAS1Q99742 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
NPAS1Q99742 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.76■□□□□ 0.11
NPAS1Q99742 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.76■□□□□ 0.11
NPAS1Q99742 AC025062.2-201ENST00000605477 670 ntBASIC15.76■□□□□ 0.11
NPAS1Q99742 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.76■□□□□ 0.11
NPAS1Q99742 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS1Q99742 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.76■□□□□ 0.11
NPAS1Q99742 CICP6-201ENST00000457191 2729 ntBASIC15.76■□□□□ 0.11
NPAS1Q99742 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
NPAS1Q99742 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS1Q99742 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS1Q99742 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.76■□□□□ 0.11
NPAS1Q99742 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS1Q99742 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS1Q99742 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS1Q99742 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
NPAS1Q99742 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.75■□□□□ 0.11
NPAS1Q99742 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.75■□□□□ 0.11
NPAS1Q99742 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms