Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNAAF3Q8N9W5 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNAAF3Q8N9W5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
DNAAF3Q8N9W5 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNAAF3Q8N9W5 NFIC-211ENST00000641145 8399 ntBASIC17.65■□□□□ 0.42
DNAAF3Q8N9W5 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.65■□□□□ 0.42
DNAAF3Q8N9W5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DNAAF3Q8N9W5 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNAAF3Q8N9W5 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNAAF3Q8N9W5 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.65■□□□□ 0.42
DNAAF3Q8N9W5 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNAAF3Q8N9W5 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.65■□□□□ 0.42
DNAAF3Q8N9W5 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
DNAAF3Q8N9W5 AC093525.9-201ENST00000624961 1746 ntBASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 ARMC10P1-201ENST00000313754 855 ntBASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 KRT17P6-201ENST00000453795 1220 ntBASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 AC011467.2-201ENST00000598425 242 ntBASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 AL358472.4-201ENST00000633140 710 ntBASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 AL121761.2-201ENST00000598007 1648 ntBASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF3Q8N9W5 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 KRT18P35-201ENST00000510488 1269 ntBASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 AC096582.2-201ENST00000510860 516 ntBASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 STK19B-204ENST00000512515 211 ntBASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 STK25P1-201ENST00000585406 838 ntBASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.63■□□□□ 0.41
DNAAF3Q8N9W5 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
DNAAF3Q8N9W5 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.62■□□□□ 0.41
DNAAF3Q8N9W5 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DNAAF3Q8N9W5 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DNAAF3Q8N9W5 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DNAAF3Q8N9W5 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DNAAF3Q8N9W5 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
DNAAF3Q8N9W5 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
DNAAF3Q8N9W5 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DNAAF3Q8N9W5 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DNAAF3Q8N9W5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms