Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 AC003669.1-201ENST00000334569 611 ntBASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 AL590627.1-203ENST00000421194 1026 ntBASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 AC005104.2-201ENST00000427818 678 ntBASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 STK19B-204ENST00000512515 211 ntBASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 AC012640.2-201ENST00000561606 901 ntBASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 AC120114.3-201ENST00000611923 658 ntBASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 NKILA-202ENST00000614771 2598 ntBASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 AC011676.5-201ENST00000624864 2660 ntBASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFWD3Q6PCD5 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 LINC00304-203ENST00000565008 1864 ntBASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms