Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
SNAPC4Q5SXM2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC27.85■■■□□ 2.05
SNAPC4Q5SXM2 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
SNAPC4Q5SXM2 BANF1P1-201ENST00000553684 263 ntBASIC27.85■■■□□ 2.05
SNAPC4Q5SXM2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC27.85■■■□□ 2.05
SNAPC4Q5SXM2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC27.85■■■□□ 2.05
SNAPC4Q5SXM2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
SNAPC4Q5SXM2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
SNAPC4Q5SXM2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC27.85■■■□□ 2.05
SNAPC4Q5SXM2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC27.85■■■□□ 2.05
SNAPC4Q5SXM2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
SNAPC4Q5SXM2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
SNAPC4Q5SXM2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SNAPC4Q5SXM2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC27.85■■■□□ 2.05
SNAPC4Q5SXM2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
SNAPC4Q5SXM2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC27.84■■■□□ 2.05
SNAPC4Q5SXM2 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC27.84■■■□□ 2.05
SNAPC4Q5SXM2 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC27.84■■■□□ 2.05
SNAPC4Q5SXM2 AC022210.1-201ENST00000449856 793 ntBASIC27.84■■■□□ 2.05
SNAPC4Q5SXM2 AC073389.1-201ENST00000595595 795 ntBASIC27.84■■■□□ 2.05
SNAPC4Q5SXM2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
SNAPC4Q5SXM2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SNAPC4Q5SXM2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC27.84■■■□□ 2.05
SNAPC4Q5SXM2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
SNAPC4Q5SXM2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
SNAPC4Q5SXM2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC27.84■■■□□ 2.05
SNAPC4Q5SXM2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
SNAPC4Q5SXM2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC27.84■■■□□ 2.05
SNAPC4Q5SXM2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
SNAPC4Q5SXM2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.05
SNAPC4Q5SXM2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC27.83■■■□□ 2.05
SNAPC4Q5SXM2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC27.83■■■□□ 2.05
SNAPC4Q5SXM2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC27.83■■■□□ 2.05
SNAPC4Q5SXM2 AL080243.2-201ENST00000418783 582 ntBASIC27.83■■■□□ 2.05
SNAPC4Q5SXM2 DFFBP1-201ENST00000433250 979 ntBASIC27.83■■■□□ 2.05
SNAPC4Q5SXM2 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
SNAPC4Q5SXM2 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
SNAPC4Q5SXM2 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC27.83■■■□□ 2.05
SNAPC4Q5SXM2 KRT17P8-201ENST00000540749 863 ntBASIC27.83■■■□□ 2.05
SNAPC4Q5SXM2 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
SNAPC4Q5SXM2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC27.83■■■□□ 2.05
SNAPC4Q5SXM2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
SNAPC4Q5SXM2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC27.83■■■□□ 2.05
SNAPC4Q5SXM2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC27.83■■■□□ 2.05
SNAPC4Q5SXM2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC27.83■■■□□ 2.05
SNAPC4Q5SXM2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.05
SNAPC4Q5SXM2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC27.83■■■□□ 2.05
SNAPC4Q5SXM2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC27.83■■■□□ 2.05
SNAPC4Q5SXM2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
SNAPC4Q5SXM2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
SNAPC4Q5SXM2 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC27.83■■■□□ 2.04
SNAPC4Q5SXM2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.04
SNAPC4Q5SXM2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.04
SNAPC4Q5SXM2 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.04
SNAPC4Q5SXM2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC27.83■■■□□ 2.04
SNAPC4Q5SXM2 SLC25A6P5-201ENST00000435663 894 ntBASIC27.83■■■□□ 2.04
SNAPC4Q5SXM2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC27.83■■■□□ 2.04
SNAPC4Q5SXM2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC27.83■■■□□ 2.04
SNAPC4Q5SXM2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC27.83■■■□□ 2.04
SNAPC4Q5SXM2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC27.83■■■□□ 2.04
SNAPC4Q5SXM2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC27.83■■■□□ 2.04
SNAPC4Q5SXM2 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC27.83■■■□□ 2.04
SNAPC4Q5SXM2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC27.82■■■□□ 2.04
SNAPC4Q5SXM2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC27.82■■■□□ 2.04
SNAPC4Q5SXM2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
SNAPC4Q5SXM2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
SNAPC4Q5SXM2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC27.82■■■□□ 2.04
SNAPC4Q5SXM2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
SNAPC4Q5SXM2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC27.82■■■□□ 2.04
SNAPC4Q5SXM2 AP000997.3-201ENST00000623333 2250 ntBASIC27.82■■■□□ 2.04
SNAPC4Q5SXM2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
SNAPC4Q5SXM2 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC27.82■■■□□ 2.04
SNAPC4Q5SXM2 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC27.82■■■□□ 2.04
SNAPC4Q5SXM2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC27.82■■■□□ 2.04
SNAPC4Q5SXM2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC27.82■■■□□ 2.04
SNAPC4Q5SXM2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC27.81■■■□□ 2.04
SNAPC4Q5SXM2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SNAPC4Q5SXM2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SNAPC4Q5SXM2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC27.81■■■□□ 2.04
SNAPC4Q5SXM2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
SNAPC4Q5SXM2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SNAPC4Q5SXM2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SNAPC4Q5SXM2 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC27.81■■■□□ 2.04
SNAPC4Q5SXM2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC27.81■■■□□ 2.04
SNAPC4Q5SXM2 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
SNAPC4Q5SXM2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC27.81■■■□□ 2.04
SNAPC4Q5SXM2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC27.81■■■□□ 2.04
SNAPC4Q5SXM2 AC008494.3-201ENST00000606615 944 ntBASIC27.81■■■□□ 2.04
SNAPC4Q5SXM2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC27.81■■■□□ 2.04
SNAPC4Q5SXM2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC27.81■■■□□ 2.04
SNAPC4Q5SXM2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC27.81■■■□□ 2.04
SNAPC4Q5SXM2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC27.81■■■□□ 2.04
SNAPC4Q5SXM2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC27.8■■■□□ 2.04
SNAPC4Q5SXM2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SNAPC4Q5SXM2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC27.8■■■□□ 2.04
SNAPC4Q5SXM2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SNAPC4Q5SXM2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SNAPC4Q5SXM2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SNAPC4Q5SXM2 TMEM14DP-201ENST00000422205 345 ntBASIC27.8■■■□□ 2.04
SNAPC4Q5SXM2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC27.8■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms