Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CX3CL1P78423 AL023806.1-201ENST00000603994 1649 ntBASIC13.99□□□□□ -0.17
CX3CL1P78423 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CX3CL1P78423 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CX3CL1P78423 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CX3CL1P78423 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CX3CL1P78423 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CX3CL1P78423 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.99□□□□□ -0.17
CX3CL1P78423 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CX3CL1P78423 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CX3CL1P78423 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CX3CL1P78423 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CX3CL1P78423 AP001094.4-201ENST00000579008 2176 ntBASIC13.99□□□□□ -0.17
CX3CL1P78423 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.99□□□□□ -0.17
CX3CL1P78423 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CX3CL1P78423 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CX3CL1P78423 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CX3CL1P78423 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CX3CL1P78423 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CL1P78423 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.98□□□□□ -0.17
CX3CL1P78423 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CX3CL1P78423 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CL1P78423 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CL1P78423 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CL1P78423 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.98□□□□□ -0.17
CX3CL1P78423 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CL1P78423 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CL1P78423 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.98□□□□□ -0.17
CX3CL1P78423 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CL1P78423 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CL1P78423 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CL1P78423 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CL1P78423 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CX3CL1P78423 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.98□□□□□ -0.17
CX3CL1P78423 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CL1P78423 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CL1P78423 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CL1P78423 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
CX3CL1P78423 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CL1P78423 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.98□□□□□ -0.17
CX3CL1P78423 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
CX3CL1P78423 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.98□□□□□ -0.17
CX3CL1P78423 AC005104.2-201ENST00000427818 678 ntBASIC13.98□□□□□ -0.17
CX3CL1P78423 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CL1P78423 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.98□□□□□ -0.17
CX3CL1P78423 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.98□□□□□ -0.17
CX3CL1P78423 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.98□□□□□ -0.17
CX3CL1P78423 AC011467.2-201ENST00000598425 242 ntBASIC13.98□□□□□ -0.17
CX3CL1P78423 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CX3CL1P78423 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.98□□□□□ -0.17
CX3CL1P78423 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CX3CL1P78423 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.98□□□□□ -0.17
CX3CL1P78423 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CL1P78423 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.98□□□□□ -0.17
CX3CL1P78423 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CX3CL1P78423 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CL1P78423 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CL1P78423 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CL1P78423 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.98□□□□□ -0.17
CX3CL1P78423 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CX3CL1P78423 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CL1P78423 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.98□□□□□ -0.17
CX3CL1P78423 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CX3CL1P78423 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CL1P78423 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.98□□□□□ -0.17
CX3CL1P78423 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CL1P78423 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CL1P78423 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CX3CL1P78423 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.98□□□□□ -0.17
CX3CL1P78423 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CX3CL1P78423 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CL1P78423 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CX3CL1P78423 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CL1P78423 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CL1P78423 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.97□□□□□ -0.17
CX3CL1P78423 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CL1P78423 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CL1P78423 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CL1P78423 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CL1P78423 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CL1P78423 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CL1P78423 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CL1P78423 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CX3CL1P78423 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CL1P78423 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.97□□□□□ -0.17
CX3CL1P78423 POM121L3P-201ENST00000419331 1163 ntBASIC13.97□□□□□ -0.17
CX3CL1P78423 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.97□□□□□ -0.17
CX3CL1P78423 AC103564.2-201ENST00000432853 1299 ntBASIC13.97□□□□□ -0.17
CX3CL1P78423 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CL1P78423 HCG4P8-203ENST00000443049 980 ntBASIC13.97□□□□□ -0.17
CX3CL1P78423 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
CX3CL1P78423 AC002558.1-201ENST00000488906 803 ntBASIC13.97□□□□□ -0.17
CX3CL1P78423 AC096582.2-201ENST00000510860 516 ntBASIC13.97□□□□□ -0.17
CX3CL1P78423 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.97□□□□□ -0.17
CX3CL1P78423 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CL1P78423 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.97□□□□□ -0.17
CX3CL1P78423 BNIP3P18-201ENST00000593976 575 ntBASIC13.97□□□□□ -0.17
CX3CL1P78423 AC099336.1-202ENST00000602961 463 ntBASIC13.97□□□□□ -0.17
CX3CL1P78423 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CL1P78423 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms