Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF144AP50876 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RNF144AP50876 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF144AP50876 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.12■□□□□ 0.17
RNF144AP50876 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF144AP50876 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RNF144AP50876 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF144AP50876 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF144AP50876 FAM220CP-201ENST00000395253 831 ntBASIC16.12■□□□□ 0.17
RNF144AP50876 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF144AP50876 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.12■□□□□ 0.17
RNF144AP50876 AC246785.2-201ENST00000432512 513 ntBASIC16.12■□□□□ 0.17
RNF144AP50876 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.12■□□□□ 0.17
RNF144AP50876 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF144AP50876 AL139327.4-201ENST00000612362 153 ntBASIC16.12■□□□□ 0.17
RNF144AP50876 AC012313.10-201ENST00000623509 926 ntBASIC16.12■□□□□ 0.17
RNF144AP50876 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF144AP50876 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
RNF144AP50876 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RNF144AP50876 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF144AP50876 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF144AP50876 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.12■□□□□ 0.17
RNF144AP50876 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF144AP50876 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF144AP50876 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF144AP50876 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF144AP50876 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF144AP50876 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF144AP50876 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF144AP50876 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF144AP50876 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF144AP50876 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF144AP50876 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF144AP50876 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
RNF144AP50876 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF144AP50876 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF144AP50876 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF144AP50876 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RNF144AP50876 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF144AP50876 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF144AP50876 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.11■□□□□ 0.17
RNF144AP50876 AC005104.2-201ENST00000427818 678 ntBASIC16.11■□□□□ 0.17
RNF144AP50876 ATP5G2P1-201ENST00000433580 426 ntBASIC16.11■□□□□ 0.17
RNF144AP50876 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF144AP50876 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF144AP50876 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.11■□□□□ 0.17
RNF144AP50876 FOSL1P1-201ENST00000511041 816 ntBASIC16.11■□□□□ 0.17
RNF144AP50876 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF144AP50876 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.11■□□□□ 0.17
RNF144AP50876 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.11■□□□□ 0.17
RNF144AP50876 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF144AP50876 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF144AP50876 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF144AP50876 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF144AP50876 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF144AP50876 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF144AP50876 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF144AP50876 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF144AP50876 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF144AP50876 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF144AP50876 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF144AP50876 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RNF144AP50876 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF144AP50876 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RNF144AP50876 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF144AP50876 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF144AP50876 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF144AP50876 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF144AP50876 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF144AP50876 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF144AP50876 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF144AP50876 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF144AP50876 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF144AP50876 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF144AP50876 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RNF144AP50876 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF144AP50876 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF144AP50876 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF144AP50876 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RNF144AP50876 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF144AP50876 AL049757.1-201ENST00000616842 1596 ntBASIC16.1■□□□□ 0.17
RNF144AP50876 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RNF144AP50876 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF144AP50876 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF144AP50876 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF144AP50876 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
RNF144AP50876 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
RNF144AP50876 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.1■□□□□ 0.17
RNF144AP50876 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.1■□□□□ 0.17
RNF144AP50876 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF144AP50876 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF144AP50876 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF144AP50876 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF144AP50876 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.1■□□□□ 0.17
RNF144AP50876 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.1■□□□□ 0.17
RNF144AP50876 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF144AP50876 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF144AP50876 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF144AP50876 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF144AP50876 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms